Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq42356 297 3e-75 seq8136 150 2e-31 >seq42356 Length=8389 Score = 297 bits (328), Expect = 3e-75 Identities = 910/1393 (65%), Gaps = 22/1393 (2%) Strand=Plus/Minus Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 ||| |||| ||| ||||||||||| || || || ||||| | || || ||||| || Sbjct 5803 CTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCC 5744 Query 68424 GGTTTTCAGACCTAGACT-CCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 ||||||||||| || || ||| || || | |||||| | || ||| | | Sbjct 5743 TGTTTTCAGACC-AGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCG 5685 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | | || || || || |||| || || || || || ||| |||| || | || || | Sbjct 5684 GCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCAG 5625 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAA-AATCTGTTTGATA 68601 |||| || || | | |||| || | |||||||| | || || | ||| ||| | Sbjct 5624 CCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTT-AGG 5566 Query 68602 TCATCTGGAAGGCTCGTATT---TTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 || | ||| | | | | | ||||||||| |||||||| | || || |||||| Sbjct 5565 TCGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTG 5506 Query 68659 ATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 | ||| |||||| || ||| || | || | || || || | || || | Sbjct 5505 ACTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACC 5446 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||| || || || | || | || || | |||| || || | || | ||| Sbjct 5445 TGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGAC 5386 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||| || || ||||| ||||| |||||||| || ||||| || |||| | || | Sbjct 5385 TCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAA 5326 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 || | || ||||| | ||||| ||||| || | ||||||||| || |||| | Sbjct 5325 TTGCGTAGCCCATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAGTT 5266 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || ||| ||| | || || || || | || || || ||| || | || Sbjct 5265 GGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAA 5206 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 || ||||| || || | || ||||| |||||||| || ||||| | |||| | || || Sbjct 5205 GTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTAC 5146 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 ||||| || || |||| |||||||| |||||||| ||| || |||||||| | Sbjct 5145 ATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGGATAGCGC 5086 Query 69079 AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC--- 69135 | | ||| ||||||||||||| || ||||| ||||| || || || | ||||||| Sbjct 5085 ATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATG 5026 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 ||| || || | || || |||| || || || || | || || ||||| || || Sbjct 5025 TTAGATGCACGT---GCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGG 4969 Query 69196 TTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC---T 69252 || || ||||| | ||| || | || || ||||||| | |||| Sbjct 4968 TTGCGTGTGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTGGCATCAGGG 4909 Query 69253 ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTT 69312 ||||||||| ||||| || || ||||| ||||| || || || | |||| | | Sbjct 4908 CGAACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAG 4849 Query 69313 GCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGA 69372 || || | ||||| ||||| || || || || || || || |||| ||| ||||| Sbjct 4848 CTGTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGG 4789 Query 69373 TTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGA 69432 || ||| ||| ||||| || ||||| | || || ||||||||||| || | ||| Sbjct 4788 TTGGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGG 4729 Query 69433 GATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT 69492 | ||| |||||| ||| | | ||| || | ||||| ||| |||| Sbjct 4728 GCTTCAATAATACTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCCCCTCT 4669 Query 69493 TTTTCATA-TTGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550 |||||||| || | ||| | ||| || || || ||||||||||| || |||| || | Sbjct 4668 TTTTCATACTTCTCGTAGAGGGCC--TCAAACTCCTCTCCCCAAACTTCCTCCAGCCCTG 4611 Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610 |||| | ||||| ||||| | |||||| |||| ||| || || ||| || | Sbjct 4610 GACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCATGAAAA 4551 Query 69611 GATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669 |||| || ||||| | ||| ||| || ||||| | | || ||||||| || ||||| Sbjct 4550 GATCAGGGATCCACAAAGC-ATAGAAAAGATCACGAGCTCGCATTTCTTCCTTCCCTGTG 4492 Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 || || ||| || || | | ||| | |||||| || || || || || || Sbjct 4491 TTCTTGCGAAGGGAAAGGAAGCTGAAGACATCCGCATGCCAAGGCTCCAGGTAGATTGCG 4432 Query 69730 ATGACTCCCGGTC 69742 | | |||| |||| Sbjct 4431 AAGGCTCCAGGTC 4419 Score = 134 bits (148), Expect = 2e-26 Identities = 296/439 (67%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 ||||||||||| || || | ||||||||||||| || |||| | || ||| |||| | Sbjct 4018 TTATTTCCTCCTTGGTCAACATATCTGGCAGTGTCGTTGAAGACCCGCAACATGGGAACA 3959 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 | ||||| ||| | ||||| || || | |||||| | || | || | || | Sbjct 3958 AGGCCATTGGATGTCCCATTAGTCCCTGCAATATATGTCCCGGTGGCCCTGATGC----A 3903 Query 69865 ATAGATA--GAC--CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGT 69920 || || | ||| | || |||||||| | ||||| |||||||| | ||| ||| Sbjct 3902 ATGGACATTGACTCCAATCCCTCCTGCTGACTGCGAGATAAGAGCACACTGCATCAGTGT 3843 Query 69921 GTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980 ||||| || || ||||| |||||| |||| | ||||| || ||| || | ||| Sbjct 3842 TTCATAAATTCCTAGAATGCTGTCATCTCGCATGGTGAGAAGGAAGCAGGAGGAGAGTTG 3783 Query 69981 ATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA 70040 | | | || || ||||| || | || || || || || |||||||| || ||||| Sbjct 3782 AGGCTTAGGGGTGCCAGCATTGAAGAGAGTGGGGGAAGCATGGGTGAACCACTTCTCAGA 3723 Query 70041 AAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGA 70099 |||||||||||||| || ||| ||| | | ||| | | | || || || | | | Sbjct 3722 GAGCAGATTGTATGTCTCGATAACTGCAGCAACATCATCTCCG-TGGATGCCAACTGACA 3664 Query 70100 CACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATG 70159 ||||||||| ||| || ||||| || || | ||| | ||| |||| ||||| | Sbjct 3663 CACGCATCAGCATGTGTTGAGGGCGCTCGGCAACTTTTCCACCTATCTTCAGGAGGTACG 3604 Query 70160 ATTTTTCCAGAGTTTTAAA 70178 | |||||| || | ||| Sbjct 3603 AGCGTTCCAGGGTCTGAAA 3585 >seq8136 Length=40417 Score = 150 bits (166), Expect = 2e-31 Identities = 285/415 (69%), Gaps = 7/415 (2%) Strand=Plus/Plus Query 39449 CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 39508 ||||| || ||||| || ||||| ||||| | | || |||||||| || | | Sbjct 18907 CTATCGGCCACAAACTCAATGTACTGCTTCATGAGCTGGCAGTTCATTCCAATCATGTCC 18966 Query 39509 ACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT-GTCTACGGCCTCTGTTATTATCGA 39567 || ||||| |||| || ||||| || | ||||| ||| ||||| || | || |||| Sbjct 18967 ACGGGTAGTGCCTTAGTCAGAAATTCCTGCTCGATTGTC-ACGGCATCGGCAATAATCGC 19025 Query 39568 TGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 || ||| ||| | |||| | | | |||||| ||||| | |||||| ||||| Sbjct 19026 AGTGACTCTCTCTTTCGACGGTTTGTTGACCAGATGTTTGAACATGAGGCAGGCAAAGTC 19085 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 || || |||||||| || | || || ||||| || || ||||||||||| | Sbjct 19086 GCAGTGGAGGCCCTCGTCGCGCGAGATCAACTCGTTGCTGAAGGTAAGTCCAGGCATAAC 19145 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 |||||||| || ||||| || ||||| || ||| || || ||||| |||||||| || Sbjct 19146 GCCACGCTTCTTCAGCCAGAAGATGGCGGCGAAACTACCGGAGAAGAAAATGCCTTCCAC 19205 Query 39748 TGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG----TATCATTATGTATCCACTTCT 39803 || ||||| || | | | || | ||| || ||||| |||||||||| Sbjct 19206 CGCAGCAAAAGCGATTACACGTTCGGC-AAACGTGGACTGATCATCCGCTATCCACTTCA 19264 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 | ||||| || ||||| ||| || |||||||| ||||| || ||||| || || Sbjct 19265 GGGCCCAGTCGGCTTTGCGCTTAACGCAAGGCATGGTTTCGATTGCATTGAACAG 19319 Score = 87.8 bits (96), Expect = 2e-12 Identities = 207/313 (66%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 39887 TATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAAT 39946 || || || |||| || || ||||| || || |||| ||| || || || | ||| || Sbjct 19404 TAAGTCTCAATTAGCATGCTGTACATCTCCGAGTGGACGTTCTCCATAGCGACCTGGAAC 19463 Query 39947 CCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTT 40006 |||||||| || | || || || | ||| ||||| | || || || ||| ||| Sbjct 19464 CCGTAAAAGCAGCGGGCCTCTGTCACTTGCACCTCCTGCCCGAACCTCTCGACCAGATTC 19523 Query 40007 TCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 40066 || || || || ||||| ||||| || || || | || || || || | Sbjct 19524 TCGTTGACGATCCCATCCGAGGCGGCGAAGAAGGCGAGGACGTGGGATATGAAGTGGCGC 19583 Query 40067 TCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 40126 || ||| ||| || | ||||| || | ||| | || | ||| || || || | Sbjct 19584 TCGTCGTCGTTCAGCTTCTCCCAGTACTTCAGGTCTCTGGAGAGATCCACCTCCTCCACG 19643 Query 40127 GTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGA 40186 ||||| || |||||||||||||| ||||||||| ||| || || | |||| || || Sbjct 19644 GTCCAGAAGGACGCCTCTGCCTTCTTGTACATGGCCCAAATGTCGGGGTATTTGATGGGG 19703 Query 40187 AAAATAACAAATC 40199 || | ||||||| Sbjct 19704 AAGACCACAAATC 19716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686342520971640