Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq42356 141 1e-28 >seq42356 Length=8389 Score = 141 bits (156), Expect = 1e-28 Identities = 820/1296 (63%), Gaps = 35/1296 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||||||||| | || | ||||| | ||||| ||||| || || || || | Sbjct 5792 TGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGCCTGTTTTCAGAC 5733 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||| |||||| |||||| ||| ||| ||| ||| || | | ||| Sbjct 5732 CAGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTCGGCTGTGCAATGT 5673 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||||| ||| || || ||| |||| || || || || ||||| | ||| Sbjct 5672 GGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCA-CCGCGGTCAGCAGCCATCTTCATC 5614 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 ||| |||| ||||||||||| || |||| | ||| | || | |||||| Sbjct 5613 ACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGGTCGTTTGGGATC 5554 Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103 || ||| | ||| ||||| ||||| | | || | | ||| | || | Sbjct 5553 CCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTGACTTCAGGGCTC 5494 Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163 || ||||| || | || || | || || || | || || || ||||||||| Sbjct 5493 CACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACCTGAAACTCACCG 5434 Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223 | || || | | ||| | ||| | ||||| | ||| | |||||||||| ||| Sbjct 5433 GACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGACTCATTGTT-CCC 5375 Query 118224 AAGATT-TGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC 118282 |||| | || || || || ||||||||||| || |||| ||| | || || || || Sbjct 5374 AAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAATTGCGTAGCCC 5315 Query 118283 CTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCC 118340 | | ||| || || || || |||| || | | | || || | || | | Sbjct 5314 ATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAG-TTGGGGTCACAC 5256 Query 118341 TGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 118400 ||||| ||| |||| || | || | | || || ||||| | ||||||||| Sbjct 5255 C-CCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAAGTCTCATAT 5197 Query 118401 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCA 118460 || || | ||| || | ||| |||| ||||| || || || | |||||||| ||| Sbjct 5196 GGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTACATTGTCTCA 5137 Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAAT 118519 || || || ||| | || || || || ||||| | || ||| |||||| Sbjct 5136 AATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATG-GATAGCGCATCAAAAT 5078 Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579 ||| |||| || |||||||| ||||| | ||||| || ||||||||||| ||||| Sbjct 5077 GAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATGTTAGATGC 5018 Query 118580 CCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 118636 || || ||| || || || | || || || | | || || || || Sbjct 5017 ACGTGC---CTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGGTTGCGTGT 4961 Query 118637 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-- 118694 ||| || | | | ||||| || ||||| | || | ||| | Sbjct 4960 GACTACATGAACAACACGCCGCAGCTTCTCAAAATCATA------GGTGGCATCAGGGCG 4907 Query 118695 -ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 ||| || | ||||| | || |||||||| ||||||| | ||||| | | Sbjct 4906 AACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAGCT 4847 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 ||||| | ||| || || |||| ||| | ||||||||| |||| |||| || || Sbjct 4846 GTACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGGTT 4787 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||||| ||| || ||||| ||||| | |||| |||| || || |||||| |||| Sbjct 4786 GGACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGGGC 4727 Query 118874 CTTGAGAATAGCCTTCCAGACATC-GGC-AGCTGGCACAGTGGCGTTGGCTCGCCCCTCT 118931 | | |||| || | ||| | ||| || || | |||| ||||||||| Sbjct 4726 TTCAATAATA--CTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCCCCTCT 4669 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC---ACGGCCTCTGAGAGCCCT 118988 | || ||||| ||||||||| |||||||| || ||| || |||| |||||| Sbjct 4668 TTTTCATACTTCTCGTAGAGGGCCTCAAACTCCTCTCCCCAAACTTCCTC---CAGCCCT 4612 Query 118989 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 119048 || ||| | |||||| | ||| |||||||| | | |||| ||||| |||||| Sbjct 4611 GGACACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCATGAAA 4552 Query 119049 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084 || || |||||||| | || |||| ||||| ||| Sbjct 4551 AGATCAGGGATCCACAAAGCATAGAAAAGATCACGA 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617925369751560