Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq42356 163 3e-35 seq1046 82.4 9e-11 >seq42356 Length=8389 Score = 163 bits (180), Expect = 3e-35 Identities = 859/1347 (64%), Gaps = 37/1347 (3%) Strand=Plus/Plus Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 ||||| |||| || ||||| ||||| |||||| || | |||||| | || | Sbjct 4431 TCGCAATCTACCTGGAGCCTTGGCATGCGGATGTCTTCAGCTTCCTTTCCCTTCGCAAGA 4490 Query 104670 ACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729 || ||| | || || ||| || ||||| |||| ||| | ||||| || |||| Sbjct 4491 ACACAGGGAAGGAAGAAATGCGAGCTCGTGATCTTTTCTATGCTTTGTGGATCCCTGATC 4550 Query 104730 TCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA 104788 | |||||| | || |||| || | |||| |||| ||| | || ||| | ||| Sbjct 4551 TTTTCATGCGTCGGGTGGAGGCTGATTCCCAAT-GGTCACTCATGTGCCCAAAGAAGTGT 4609 Query 104789 CCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAA 104848 || || || || | ||| ||||||||||| ||||| ||| ||||| || || Sbjct 4610 CCAGGGCTGGAGGAAGTTTGGGGAGAGGAGTTTGAGGCCCTCTACGAGAAGTATGAAAAA 4669 Query 104849 GAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCT 104908 || || ||| | | | | || || | | ||||| |||| | | | Sbjct 4670 GAGGGGCGGTACAACAAGCAGATTCCTGCACGCCAGCTGTGGCGCAGTATTATTGAAGCC 4729 Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968 || ||||||||||| |||| |||| | |||||||| ||||| |||| ||| || Sbjct 4730 CAGGTGGAGACTGGTACTCCATTCATGGTCTACAAAGATGCCTGCAACCGCAAGTCCAAC 4789 Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028 || ||||| ||||| || ||| | ||| || ||||| || || | | | ||| Sbjct 4790 CAGCAGAATGTGGGTACCATTAAGTGCAGCAACCTGTGTACTGAGATTGTTCAGT--ACA 4847 Query 105029 GACAA--AGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086 | |||||| | |||||||| || || ||||| | || || || || ||| Sbjct 4848 GCTCTGCAGATGAAATTGCTGTGTGCAATCTGGCATCCGTTGCCCTGAACATGTTTGTTC 4907 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || || | | | | ||||| ||| || || | ||| | ||||| Sbjct 4908 GCCCTGATGCCA---CCTATGATTTTGAGAAGCTGCGGCGTGTTGTTCATGTAGTCACAC 4964 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAAT 105203 ||||| |||| | | ||||| || | ||||| ||| ||| || ||| || Sbjct 4965 GCAACCTGAACAAAATCATTGAGGTCAACTACTACCCGGTTCCTGAG---GCACGTGCAT 5021 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 |||| |||||||| ||||| ||||| | |||||||| ||||| || |||| ||||||| Sbjct 5022 CTAACATGAGACATCGTCCCATTGGAATTGGTGTTCAAGGTCTGGCAGATGCATTCATTT 5081 Query 105264 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGA 105323 | ||| | ||||||| || ||||| || ||||| | |||||||||| Sbjct 5082 TGATGCGCTATCCATTTGAGAGTGAGGAAGCACAGCGTCTCAATATTCAGATATTTGAGA 5141 Query 105324 CCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATG 105383 | ||||| | || || |||||||| || | || | || ||| |||||||||||| Sbjct 5142 CAATGTACTATGCTGCACTTGAGGCCAGCTGTGAACTTGCTGAGAAGTATGGTCCATATG 5201 Query 105384 AAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGG 105441 | || | ||||| ||| || || |||||| |||||| | ||| |||||| | Sbjct 5202 AGACTTACGAGGGCAGTCCTGC--CAGCAAGGGCAGGCTTCAGTATGACTTGTGGG-GTG 5258 Query 105442 TGAGACCAAGCT--TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGT 105499 ||| |||| || | | || |||| ||| || || || || || | || Sbjct 5259 TGACCCCAA-CTGACCTGTGGGATTGGGCAGCACTGAAAGAGAAAATTGCCAAGCATGGG 5317 Query 105500 CTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA-AATCTTGGG 105558 || || || | ||| ||||||||||||| ||||| || || || || | ||||||| Sbjct 5318 CTACGCAATTCATTGCTCCTGGCTCCAATGCCCACAGCATCAACGGCTCAGATTCTTGGG 5377 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGG 105618 || ||||| | | || ||||||| | || | ||| | | | || | || Sbjct 5378 -AACAATGAGTCTATCGAGGCCTACACTTCTAATGTGTATGTCCGCCGTGTTCTGTCCGG 5436 Query 105619 AGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTC 105678 |||||| | | || ||| | || || || | ||||| | ||| ||||| ||| Sbjct 5437 TGAGTTTCAGGTCGTGAACCACCACCTGCTGAAAGACCTGACTGAGCGAGGTCTGTGGAG 5496 Query 105679 CAAGGATATGAAGGATC---TCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGG 105734 | || | ||| | | ||| || ||| ||||| ||||||||| | || || Sbjct 5497 CCCTGAAGTCAAGAACCAGATCATTGCTGA----TGGTGGCTCCATTCAACAGATCAAGG 5552 Query 105735 ATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATG 105794 || ||||| || | ||| |||||| || || |||||||| |||| || Sbjct 5553 GGATCCCAAACGACCTAAAGGCATTGTACAAAACGGTGTGGGAAATGTCACAGAAGACTG 5612 Query 105795 TCATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTC 105853 | || | ||||| || || || ||| |||| |||||| || || || |||| || Sbjct 5613 TGATGAAGATGGCTGCTGACCGCGGT-GCTTACATTGACCAGAGCCAGTCACTGAACATC 5671 Query 105854 TTCA-TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAA 105912 || || | || | | | ||| ||| | | || ||||| |||| | |||||| Sbjct 5672 CACATTGCACAGCCGACCTATG-GGAAGATGTGCTCCATGCATCTGTATGGGTGGAAGGC 5730 Query 105913 GGGTCTCAAAACGGGGATGTATTACCT 105939 ||||| ||||| || ||||||||||| Sbjct 5731 TGGTCTGAAAACAGGCATGTATTACCT 5757 >seq1046 Length=34766 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 9782 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATT 9840 |||||||||||||||||||||| || | | | || || || |||||| |||||||| Sbjct 18030 CCCACACCAACAAACATCTCCAGGAACTCAGACCCAGA-CACTGTGATGAAAGGGACATT 18088 Query 9841 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAG 9900 | ||| || ||| |||| ||| | |||||||| || || || || ||| | ||| Sbjct 18089 TGCTTCTCCAGCAGTGGCCTTGGCCAAGAGAGTCTTCCCAGTGCCAGGAGGACCTGTGAG 18148 Query 9901 GAGGGCACCTCGTGGAATCTTGGCGCC 9927 || ||| || ||| ||||||||||| Sbjct 18149 GATGGCGCCCTTTGGGATCTTGGCGCC 18175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582779967087240