Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq29144 123 2e-23 seq16489 98.7 9e-16 seq2983 91.5 1e-13 >seq29144 Length=118640 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || ||| Sbjct 105639 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCTTCC 105698 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || ||||| ||||| || ||||| || || Sbjct 105699 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAG 105758 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||| ||| | ||| | ||| |||||| Sbjct 105759 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAAC 105818 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||||||| | || |||| |||| |||| || ||| Sbjct 105819 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTGCGCCTGCGTGGCGGC 105866 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || || || || || | Sbjct 105411 ATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCTAGC 105470 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| ||||| || || || ||||| || ||||| |||||||| || Sbjct 105471 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 105530 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| ||||| || | || ||| | ||| | ||| |||||| Sbjct 105531 CAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGAGCGACTACAAC 105590 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || |||||| | || |||| ||||| || Sbjct 105591 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTTCGCCTGCGTGGTGGTAT 105640 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| ||||| |||||| | || || ||||| || || || | Sbjct 103729 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGAGCCTAGC 103788 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||||| || || || ||||| || || ||||| Sbjct 103789 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 103848 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || | ||||| || Sbjct 103849 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAAT 103908 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| |||| ||||| |||| ||||| || Sbjct 103909 ATCCAGAAGGAGTCGACGCTCCATCTGGTGCTGCGTCTGCGTGGTGGTAT 103958 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || |||||||| || || ||| | Sbjct 104271 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCGAGC 104330 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || || || || ||||| || || ||||| Sbjct 104331 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 104390 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | ||||| | ||| | |||||||||| Sbjct 104391 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAAC 104450 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || |||||||| || | ||| |||| Sbjct 104451 ATCCAGAAGGAGTCTACACTTCATCTGGT 104479 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || ||||| || || || || | Sbjct 104727 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104786 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| ||||| || || || || || Sbjct 104787 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 104846 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||| || | || | ||| ||||| Sbjct 104847 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAAT 104906 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | |||||||| ||||| | || ||||| || Sbjct 104907 ATCCAGAAGGAGTCGACCCTGCATTTGGTCCTGCGTCTCCGTGGTGGTAT 104956 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| || || || | Sbjct 103957 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCTAGC 104016 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || || || || || || || || || || ||||| || || Sbjct 104017 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCAGACCAG 104076 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || || | ||| | ||| |||||| Sbjct 104077 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAAC 104136 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||||||||| | || ||||| |||| Sbjct 104137 ATCCAGAAGGAGTCGACGCTTCACTTGGTGCTGCG 104171 >seq16489 Length=130489 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| || ||| | || || ||||| ||||| | || Sbjct 52298 ATGCAGATCTTTGTCAAGACTTTGACGGGGAAGACCATCACCCTTGAGGTGGAGGCCTCG 52239 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || ||||| || || || || || || || Sbjct 52238 GACACTATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 52179 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| |||| | || || || ||| |||| || | ||| | ||| |||||| Sbjct 52178 CAGCGACTAATTTTTGCTGGGAAGCAACTGGAGGATGGCCGCACCCTGAGCGACTACAAC 52119 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | ||| | || | || | || ||||| Sbjct 52118 ATCCAGAAGGAGTCGACCCTCCATCTTGTGCTCCGCCTCCGAGGTGG 52072 >seq2983 Length=43370 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 49818 ATACGCACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGC 49877 ||||| ||| || || | |||||| ||||| | || || || || |||| || || || Sbjct 6267 ATACGAACCTGGGAAGCGGCATTGGCTGAAAGTGAAGAAGGATTATTTGTCAGAAGGAGC 6208 Query 49878 CATGGCCGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGG 49937 |||||| || || | ||| |||| || |||||||||||||| || | ||| ||||||| Sbjct 6207 CATGGCTGACAGTGCCGATCTGGTAGTATTGGGTGCATGGTATGGCACGGGACAAAAGGG 6148 Query 49938 TGGCTTCTTGTCTACATTTTTGATGGGATGTCTCGACACAAACCGAAACGTTTGGACGAC 49997 || | ||||| || | ||||| || |||| || |||| ||| || Sbjct 6147 AGGGATGATGTCTGTCTTCCTAATGGGCTGCTACGACGAAATGAAAAACAAGTGGTGCAC 6088 Query 49998 AGTAACAAAGGTGCACACAGGCCAC 50022 || ||||| || ||||| |||||| Sbjct 6087 CGTCACAAAAGTACACACGGGCCAC 6063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434559858707520