Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq29144 181 2e-40 seq16489 140 8e-28 >seq29144 Length=118640 Score = 181 bits (200), Expect = 2e-40 Identities = 176/225 (78%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| || || || || || || |||||||| || |||||||| || || ||||| Sbjct 105404 ACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 105345 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||||||||| |||||||| ||||| || ||||||||||||| ||| Sbjct 105344 GCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCC 105285 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069 |||||||||||||||||| || || || ||||||||||| ||| |||||||| Sbjct 105284 TTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTC---GCTAGGCTCAACCTC 105228 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| |||||||| ||||| ||||| || || | ||||| Sbjct 105227 CAACGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 172 bits (190), Expect = 1e-37 Identities = 168/215 (78%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || || ||||| || ||||| || || || || || | ||||| Sbjct 104938 AGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCC 104879 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 104878 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 104819 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| |||||||| || |||||||| ||| ||||||||||||||||| Sbjct 104818 TGGATCTTGGCCTTCACGTTCTCAATGGTGTC---GCTAGGCTCAACCTCGAGAGTGATG 104762 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| ||||| || || | ||||| Sbjct 104761 GTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 159 bits (176), Expect = 8e-34 Identities = 171/225 (76%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| || || || || ||||| || ||||| || |||||||| ||||| ||||| Sbjct 104492 ACGAAGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 104433 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||||||||| |||||||| || || || || || || |||| || Sbjct 104432 GCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCC 104373 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069 ||||| ||||||||||| || ||||| ||||||||||| ||| |||||||| Sbjct 104372 CTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---GCTCGGCTCAACCTC 104316 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || || | ||||| || || | |||||| Sbjct 104315 AAGAGTGATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 158 bits (174), Expect = 3e-33 Identities = 170/224 (76%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | || || || ||||| || || || |||||||| || || || || Sbjct 104719 CGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTG 104660 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||| |||||| || |||||||| ||||| || ||||| || |||| ||| Sbjct 104659 CGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCT 104600 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCG 211070 |||||||| |||||||| |||||||| || ||||| || ||| ||||||||| Sbjct 104599 TCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATC---GCTAGGCTCAACCTCG 104543 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || ||||| ||||| || || | |||||| Sbjct 104542 AGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || ||||| | || || Sbjct 105850 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCC 105791 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| ||||| || ||||| || || | |||||||||||| Sbjct 105790 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC 105731 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || ||||| || ||||| ||| Sbjct 105730 TGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTC 105671 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 105670 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 138 bits (152), Expect = 3e-27 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || | |||||| || ||||| || |||||||| || || ||||| | Sbjct 104174 AGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 104115 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || ||||||||||| |||||||| ||||| || ||||| || || | || ||| Sbjct 104114 CCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCC 104055 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGA 211073 || ||||||||||| ||||| || |||||||| || ||| |||||||| || Sbjct 104054 TTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATC---GCTAGGCTCAACCTCAAGG 103998 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| || || | |||||| Sbjct 103997 GTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 136 bits (150), Expect = 9e-27 Identities = 160/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || ||||| || ||||| |||||||| || || | ||||| Sbjct 103940 AGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGTGCGGCCATCC 103881 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || || || |||| || ||||| ||| Sbjct 103880 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 103821 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| ||||| || ||||||||||| ||| |||||||| || ||||| Sbjct 103820 TGAATCTTCGCCTTCACATTCTCGATGGTGTC---GCTAGGCTCAACCTCAAGCGTGATG 103764 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || || ||||| | |||||| Sbjct 103763 GTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 134 bits (148), Expect = 3e-26 Identities = 165/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | || || || ||||| || || || |||||||| || || || || Sbjct 105175 CGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTG 105116 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||| |||||| || |||||||| ||||| || ||||| || || | || Sbjct 105115 CGGCCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCC 105056 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCG 211070 ||||| |||||||||||| ||||||||| || |||||||| ||| || || ||| Sbjct 105055 TCCTTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTC---GCTAGGCTCCACTTCG 104999 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || || || || || || | |||||| Sbjct 104998 AGGGTAATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 132 bits (146), Expect = 1e-25 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| || || ||||| | || || Sbjct 105622 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCC 105563 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || || | || ||||||||| Sbjct 105562 TCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 105503 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || ||||| |||||||| || ||| |||||||| || ||||| Sbjct 105502 TGGATCTTGGCCTTGACGTTCTCGATGGTATC---GCTAGGCTCAACCTCCAGGGTGATG 105446 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 105445 GTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 >seq16489 Length=130489 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || || ||||| || |||||||| || || ||||| | ||||| Sbjct 52087 AGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 52146 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || || || || || || || ||||| || || | || ||||||||| Sbjct 52147 TCCAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 52206 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| || ||||| || ||||| ||| Sbjct 52207 TGGATCTTGGCCTTGACATTCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTC 52266 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | |||||| ||||| | |||||| Sbjct 52267 TTCCCCGTCAAAGTCTTGACAAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158172519820115