Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq29144 98.7 7e-16 >seq29144 Length=118640 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || || || ||||||||||| ||||| | | Sbjct 104727 ATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104786 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || || || || Sbjct 104787 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 104846 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| || ||||| || | |||||| | |||| ||||| Sbjct 104847 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAAT 104906 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || ||||| || | ||||| || Sbjct 104907 ATCCAGAAGGAGTCGACCCTGCATTTGGT 104935 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| ||| | || || || || |||||||| || ||||| | | Sbjct 104271 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCGAGC 104330 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || || || || | || |||||||| Sbjct 104331 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 104390 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || || ||||| | ||||| | ||||||||||| Sbjct 104391 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAAC 104450 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| ||| | ||| | || | ||| | || || || Sbjct 104451 ATCCAGAAGGAGTCTACACTTCATCTGGTGCTCAGGCTTCGTGGCGG 104497 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || || || || ||||| || || ||||| | | Sbjct 103729 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGAGCCTAGC 103788 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| || || || || | || |||||||| Sbjct 103789 GACACCATCGAGAATGTGAAGGC-GAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCA 103847 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || ||||| || | ||||| | | ||||| || Sbjct 103848 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAA 103907 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 103908 TATCCAGAAGGAGTCGAC 103925 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||||||||| ||||| | | Sbjct 104499 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGCCTAGC 104558 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || || ||||| ||||| | || ||||| || Sbjct 104559 GATACCATTGAGAACGTGAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 104618 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || || || || |||| || | |||||| | |||| |||||| Sbjct 104619 CAGCGCCTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAAC 104678 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || || || || || | ||| | || || || Sbjct 104679 ATCCAGAAGGAATCAACTCTCCATCTGGTGTTGAG 104713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337737915383108