Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq29144 143 6e-29 seq50053 140 8e-28 seq16489 134 3e-26 seq15462 132 1e-25 >seq29144 Length=118640 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| || || || || ||||| ||||| || || |||| ||||| ||| || || Sbjct 105404 ACGAAGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 105345 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || |||||||| || || || ||||| || ||||| || Sbjct 105344 GCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCC 105285 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| ||| ||||||||||| | || || || || Sbjct 105284 TTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAA 105225 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || || | || || | ||| | |||||| Sbjct 105224 CGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 |||||||||| || || |||||||| ||||| || |||| ||||| ||| || ||| Sbjct 104719 CGAAGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTG 104660 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || | |||||| ||||||||||| || || || ||||| || ||||| ||| Sbjct 104659 CGGCCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCT 104600 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| |||||| || ||||| || | || || || | Sbjct 104599 TCCTTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGA 104540 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 104539 GTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| || || || || |||| ||||| ||| || || Sbjct 105860 ACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 105801 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||| || || || || Sbjct 105800 GCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCC 105741 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||||||| ||||||||||| || | || || || | Sbjct 105740 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAG 105681 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||| || || | ||| | ||||| Sbjct 105680 GGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| || || || || || || || || || || |||| ||||||||| || || Sbjct 104492 ACGAAGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 104433 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||||||||| || || || || || || ||||| || Sbjct 104432 GCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCC 104373 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || |||||||| ||| || ||||||||||| | || || || | Sbjct 104372 CTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACCTCAAG 104313 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| ||||| || || | ||| | ||||| Sbjct 104312 AGTGATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | || || || || || || |||| |||||| ||| || ||| Sbjct 104948 ACGGAGACGCAGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGT 104889 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || ||||| || Sbjct 104888 GCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCC 104829 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| |||||| || |||||||| | || || || | Sbjct 104828 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAG 104769 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | |||||| Sbjct 104768 AGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 118 bits (130), Expect = 3e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| ||| || | ||| || || || || || |||| ||||| ||| || || | Sbjct 104174 AGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 104115 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 104114 CCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCCTCC 104055 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || |||||||| ||||||| |||||||| || | || || || | ||| Sbjct 104054 TTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCAAGGGTG 103995 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| ||||| || || | ||| | ||||| Sbjct 103994 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || || ||||| || || || || |||| ||| ||||| || || Sbjct 103950 ACGCAGACGCAGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGT 103891 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || || || || ||||| || Sbjct 103890 GCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCC 103831 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||||||| ||||||||||| | || || || | Sbjct 103830 CTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACCTCAAG 103771 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 |||||| |||||||| |||| ||||| Sbjct 103770 CGTGATGGTCTTGCCAGTCAGGGTTTT 103744 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| ||||| ||| || || | || || Sbjct 105622 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCC 105563 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || |||||||| || || || |||||||| Sbjct 105562 TCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 105503 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | || || || | ||||| ||| Sbjct 105502 TGGATCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTC 105443 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 105442 TTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 105411 >seq50053 Length=11587 Score = 140 bits (154), Expect = 8e-28 Identities = 133/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | || ||||| ||| | || || ||||| || |||| ||||||||| | |||||| Sbjct 1678 CAAATCTATAACGTAATTGTCACTGCACATGCTTTCATTATAATTTTCTTTATAGTTATG 1619 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || ||||||| || ||||| || || ||||| || | ||||| |||| ||||| || Sbjct 1618 CCTATTATGATTGGAGGTTTTGGTAACTGATTAGTCTCATTAATACTTGGGGCTCCAGAC 1559 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721 ||||| |||||| | |||||||| ||||| || ||| ||||||||||||| Sbjct 1558 ATGGCATTTCCACGTCTTAACAACATAAGATTCTGACTACTACCGCCTTC 1509 >seq16489 Length=130489 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| ||||| || || || || |||| ||||| ||| || || | ||||| Sbjct 52087 AGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 52146 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||||||||| || || ||||| || ||||| || || || || |||||||| Sbjct 52147 TCCAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 52206 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| |||| ||||| || | ||||| ||| Sbjct 52207 TGGATCTTGGCCTTGACATTCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTC 52266 Query 225682 TTGCCCGTCAAAGTTTT 225698 || ||||||||||| || Sbjct 52267 TTCCCCGTCAAAGTCTT 52283 >seq15462 Length=1761 Score = 132 bits (146), Expect = 1e-25 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| | || ||||| ||| | || || ||||| || |||||||||||||| | ||||| Sbjct 953 CCAAATCTATAACGTAATTGTCACTGCTCATGCTTTCATTATGATTTTCTTTATAGTTAT 1012 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 ||| ||||||| || || || || || ||||| || || ||||| |||| || || || Sbjct 1013 GCCTATTATGATTGGGGGGTTTGGTAACTGATTAGTACCGTTAATACTTGGAGCACCAGA 1072 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721 || || || ||| | |||||||| || || || ||||||||||||||||| Sbjct 1073 CATAGCATTCCCACGTCTTAACAACATGAGATTCTGATTACTACCGCCTTC 1123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191523514489994