Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8136 113 4e-20 >seq8136 Length=40417 Score = 113 bits (124), Expect = 4e-20 Identities = 215/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||| ||||| || ||||| | ||| ||||| || || || | || || ||||| | ||| Sbjct 19400 AATGTAAGTCTCAATTAGCATGCTGTACATCTCCGAGTGGACGTTCTCCATAGCGACCTG 19459 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 || ||||||||||| | || ||||| ||||| || || | | || || || || | Sbjct 19460 GAACCCGTAAAAGCAGCGGGCCTCTGTCACTTGCACCTCCTGCCCGAACCTCTCGACCAG 19519 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 || ||||| || || || || ||| || || || || | || || ||||| |||| Sbjct 19520 ATTCTCGTTGACGATCCCATCCGAGGCGGCGAAGAAGGCGAGGACGTGGGATATGAAGTG 19579 Query 4997 CTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTC 5056 | ||||| || || || | ||||| || ||| | | | ||| || || || Sbjct 19580 GCGCTCGTCGTCGTTCAGCTTCTCCCAGTACTTCAGGTCTCTGGAGAGATCCACCTCCTC 19639 Query 5057 AACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAAT 5116 || ||||| || ||||| || || || |||||||| | |||||| || || || | || Sbjct 19640 CACGGTCCAGAAGGACGCCTCTGCCTTCTTGTACATGGCCCAAATGTCGGGGTATTTGAT 19699 Query 5117 CGGAAGTATGACAAATC 5133 || | | ||||||| Sbjct 19700 GGGGAAGACCACAAATC 19716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426706347006683