Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7486 123 2e-23 >seq7486 Length=166660 Score = 123 bits (136), Expect = 2e-23 Identities = 236/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || ||||| | || | |||| | || || || | || ||| ||||||||| || Sbjct 33856 AGTCCAGTGACCTCTGCGACCATGCAGGTAAGAAGGGCATAACTGCTGATGTTAAATGGC 33797 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || ||||| |||| ||| |||| | |||||||||||| || || | ||| |||| | Sbjct 33796 ACTCCGAGACCCAAGTCTGCCGATCGCTGGTAGAGCTGGCAGGACAACTCCCCATTGGCG 33737 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387 ||||| ||||| || | | ||||| ||||| |||||||| | | || || Sbjct 33736 ACGTAGAACTGGCAGAGGCAATGGCAGGGAGGTAGAGCCATTTTGGGGATATCCACAGGA 33677 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCA-CGGC 27446 |||||||||| || | || || | ||| || || | | | ||| |||| | | | Sbjct 33676 TTCCAGGCGCTCATTACAATTCGGCGGTCATCCGGATCTGACTTAATGCGGTCGATCAGA 33617 Query 27447 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGC 27506 || |||||| ||||| ||| | || | |||||| | ||||||| ||||| || Sbjct 33616 CCCTT-CAGCTGGTCCACACCCTTGCCGGTGTAGTCGGACTTCATGTCGCCATACTCCGC 33558 Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 || || || | ||| ||||| || |||||||| || ||||| || Sbjct 33557 CCCAAAGTGACGCCACTGGAAGCCATACACCGGGCCGAGGTCGCC 33513 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 27550 CCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCC 27609 || || ||||||| ||| ||| ||||||||| || | || || | ||| || ||| Sbjct 33460 CCTTCCTCCCTGTCGGTGAACCCCATCTTGTCCAGGAACTGTCGCGAGCTGTTAGCATCC 33401 Query 27610 CAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCAC 27669 ||||| | || ||||||| || |||| ||| || ||| | || | ||||||||| Sbjct 33400 CAGATATGCACTCCCTTCTGCGACAGCTGCGTGGCGTCGGTGCATCCCCGTACGAACCAC 33341 Query 27670 AGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 27716 |||||||||||||| || ||||||| | ||||||||||| || || Sbjct 33340 AGCAGCTCCTCCACCACTCCCTTCCAGTACACCCTCTTGGTGGTCAG 33294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369210198311081