Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq42356 266 4e-66 >seq42356 Length=8389 Score = 266 bits (294), Expect = 4e-66 Identities = 897/1389 (65%), Gaps = 12/1389 (1%) Strand=Plus/Minus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| |||| ||| |||||||| || | || || ||||| | || || ||||| | Sbjct 5804 TCTTGTCCACTGTGAACTGAATGGGCTTGGCAGCAGGCTTTGTCCTCAGGTAATACATGC 5745 Query 76831 CAGTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 | ||||| ||||| || || ||| || || | ||||||| || || ||| | Sbjct 5744 CTGTTTTCAGACC-AGCCTTCCACCCATACAGATGCATGGAGCACATCTTCCCATAGGTC 5686 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 || | || || || || |||| ||||| || || || ||| |||| || | ||||| Sbjct 5685 GGCTGTGCAATGTGGATGTTCAGTGACTGGCTCTGGTCAATGTAAGCACCGCGGTCAGCA 5626 Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009 ||||| || || | ||||| || | |||||||| | |||||| | | | || | Sbjct 5625 GCCATCTTCATCACAGTCTTCTGTGACATTTCCCACACCGTTTTGTACAATGCCTTTAGG 5566 Query 77010 TCATCTGGAAGGT--TTG-TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT 77066 || | ||| | ||| | | ||||||||| |||||||| | || || ||||| Sbjct 5565 TCGTTTGGGATCCCCTTGATCTGTTGAATGGAGCCACCATCAGCAATGATCTGGTTCTTG 5506 Query 77067 ATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126 | ||| |||||| | ||| || | || | || || || | || || | Sbjct 5505 ACTTCAGGGCTCCACAGACCTCGCTCAGTCAGGTCTTTCAGCAGGTGGTGGTTCACGACC 5446 Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||| || || |||| || | || || | |||| || || | || | ||| Sbjct 5445 TGAAACTCACCGGACAGAACACGGCGGACATACACATTAGAAGTGTAGGCCTCGATAGAC 5386 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 |||||||| || | ||| ||||| || || || || ||||| || |||| | || | Sbjct 5385 TCATTGTTCCCAAGAATCTGAGCCGTTGATGCTGTGGGCATTGGAGCCAGGAGCAATGAA 5326 Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306 || | || ||||| | ||||| ||||| || | ||||||||| || || | Sbjct 5325 TTGCGTAGCCCATGCTTGGCAATTTTCTCTTTCAGTGCTGCCCAATCCCACAGGTCAGTT 5266 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366 || ||| |||| | || || || || | || || || ||| || | || Sbjct 5265 GGGGTCACACCCCACAAGTCATACTGAAGCCTGCCCTTGCTGGCAGGACTGCCCTCGTAA 5206 Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426 || ||||| || || | | ||||| |||||||| || || || | ||| | || || Sbjct 5205 GTCTCATATGGACCATACTTCTCAGCAAGTTCACAGCTGGCCTCAAGTGCAGCATAGTAC 5146 Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486 ||||| || || |||| |||||||| |||||||| ||| ||||| ||||| | Sbjct 5145 ATTGTCTCAAATATCTGAATATTGAGACGCTGTGCTTCCTCACTCTCAAATGGATAGCGC 5086 Query 77487 AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 | | ||| || |||||||| | || ||||| ||||| ||||| || | ||||||| | Sbjct 5085 ATCAAAATGAATGCATCTGCCAGACCTTGAACACCAATTCCAATGGGACGATGTCTCATG 5026 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || || || |||| || || || || | || || ||||| || || || Sbjct 5025 TTAGATGCACGTGCCTCAGGAACCGGGTAGTAGTTGACCTCAATGATTTTGTTCAGGTTG 4966 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTAT---A 77663 | ||||| | ||| || | || || ||||||| | | |||| | Sbjct 4965 CGTGTGACTACATGAACAACACGCCGCAGCTTCTCAAAATCATAGGTGGCATCAGGGCGA 4906 Query 77664 ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA 77723 ||||||||||||| || | ||||| ||||| || || || | |||| || | Sbjct 4905 ACAAACATGTTCAGGGCAACGGATGCCAGATTGCACACAGCAATTTCATCTGCAGAGCTG 4846 Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 || || | ||||| ||||| || || || || || || || |||| ||| || |||||| Sbjct 4845 TACTGAACAATCTCAGTACACAGGTTGCTGCACTTAATGGTACCCACATTCTGCTGGTTG 4786 Query 77784 CTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843 ||| ||||| | || || || | || || ||||| || || || | ||| | | Sbjct 4785 GACTTGCGGTTGCAGGCATCTTTGTAGACCATGAATGGAGTACCAGTCTCCACCTGGGCT 4726 Query 77844 TCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTT 77903 || |||||| ||| | | || ||| ||||| |||| |||| || Sbjct 4725 TCAATAATACTGCGCCACAGCTGGCGTGCAGGAATCTGCTTGTTGTACCGCCCCTCTTTT 4666 Query 77904 TCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 ||||| | ||| | ||| ||||| || ||||||||||| || |||| || || | Sbjct 4665 TCATACTTCTCGTAGAGGGCC--TCAAACTCCTCTCCCCAAACTTCCTCCAGCCCTGGAC 4608 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 | | ||||||||||| | |||||| | ||| ||| || || ||| || |||| Sbjct 4607 ACTTCTTTGGGCACATGAGTGACCATTGGGAATCAGCCTCCACCCGACGCATGAAAAGAT 4548 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||| ||||| | |||| || ||||| || | || |||||| || ||||| |||| Sbjct 4547 CAGGGATCCACAAAGCATAGAAAAGATCACGAGCTCGCATTTCTTCCTTCCCTGTGTTCT 4488 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 | ||| || || | | ||| | |||||| || || || || ||||| | Sbjct 4487 TGCGAAGGGAAAGGAAGCTGAAGACATCCGCATGCCAAGGCTCCAGGTAGATTGCGAAGG 4428 Query 78142 CTCCAGGTC 78150 ||||||||| Sbjct 4427 CTCCAGGTC 4419 Score = 118 bits (130), Expect = 1e-21 Identities = 255/381 (67%), Gaps = 8/381 (2%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| ||||| || || | ||||||||| |||| || | || | |||||| |||| | Sbjct 4018 TTATTTCCTCCTTGGTCAACATATCTGGCAGTGTCGTTGAAGACCCGCAACATGGGAACA 3959 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | || || ||||| ||||| || || | |||||| | || | || | || | Sbjct 3958 AGGCCATTGGATGTCCCATTAGTCCCTGCAATATATGTCCCGGTGGCCCTGATGC----A 3903 Query 78273 ATGGATATC----CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 ||||| || || || |||||||| || || || ||||| || | ||| ||| Sbjct 3902 ATGGACATTGACTCCAATCCCTCCTGCTGACTGCGAGATAAGAGCACACTGCATCAGTGT 3843 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388 || || || || || |||||||| |||| | ||||| || ||| || | ||| Sbjct 3842 TTCATAAATTCCTAGAATGCTGTCATCTCGCATGGTGAGAAGGAAGCAGGAGGAGAGTTG 3783 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 | | | | || || ||||| || | || || || ||||| || ||||| || ||||| Sbjct 3782 AGGCTTAGGGGTGCCAGCATTGAAGAGAGTGGGGGAAGCATGGGTGAACCACTTCTCAGA 3723 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508 || ||||||||||| || ||| ||| | | || | || || || || | || Sbjct 3722 GAGCAGATTGTATGTCTCGATAACTGCAGCAACATCATCTCCGTGGATGCCAACTGACAC 3663 Query 78509 ACGCATCAACATATGCTGAGG 78529 |||||||| ||| || ||||| Sbjct 3662 ACGCATCAGCATGTGTTGAGG 3642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694096123724640