Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq29144 114 3e-20 seq16489 107 4e-18 >seq29144 Length=118640 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || ||||| || |||||||| |||||||| || ||||||||||||||| | || | Sbjct 104488 AGCCTGAGCACCAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGG 104429 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || |||||||| || | |||||| || | | || || ||| Sbjct 104428 CCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCC 104369 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || ||||| |||| | | |||| ||| || |||||||| Sbjct 104368 TTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTCGGCTCAACCTCAAGAGTG 104309 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| ||||||| |||||| Sbjct 104308 ATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 104271 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || ||||| ||||| || || || ||||||||||| ||| | ||| | Sbjct 105172 AGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGG 105113 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || | || ||||||||||| || | ||||||||| | | ||| || ||| Sbjct 105112 CCATCCTCCAACTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCC 105053 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || ||| ||| || |||| | | |||| | ||| ||||| || ||| Sbjct 105052 TTATCCTGGATCTTTGCTTTCACGTTCTCAATGGTGTCGCTAGGCTCCACTTCGAGGGTA 104993 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || || ||||||| |||||| Sbjct 104992 ATGGTCTTGCCAGTCAGCGTTTTGACGAAGATCTGCAT 104955 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || ||||| || ||||| || || ||||| || ||||||||||| ||| | || | Sbjct 105400 AGCCTGAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 105341 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || ||||||||||| || | ||||||||| | | ||||||||| Sbjct 105340 CCATCTTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCC 105281 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| |||| | | |||| | ||| || || | || Sbjct 105280 TTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGCTAGGCTCAACCTCCAACGTG 105221 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||||||||||| ||||| Sbjct 105220 ATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCAT 105183 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| || || ||||| || ||||| ||||| ||| | ||| | ||||| Sbjct 104938 AGGACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGGCCATCC 104879 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | ||||||||||| || Sbjct 104878 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 104819 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | | |||| | ||| || || ||||| || || Sbjct 104818 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTAGGCTCAACCTCGAGAGTGATGGTC 104759 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| ||||| Sbjct 104758 TTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 104727 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| ||| | || | || || Sbjct 105850 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCC 105791 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | ||| |||||||| || Sbjct 105790 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC 105731 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | | |||| ||| ||| || || || || || || Sbjct 105730 TGGATCTTGGCCTTCACATTCTCGATGGTGTCGGAAGGCTCGACCTCCAGGGTGATGGTC 105671 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 105670 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 105639 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || ||||| ||||| || || || ||||||||||| ||| | ||| | Sbjct 104716 AGTCTCAACACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGG 104657 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || | || || |||||||| || | ||||||||| | | || |||||| Sbjct 104656 CCATCCTCCAACTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCC 104597 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || || || |||| | | | || | ||| || || ||||| Sbjct 104596 TTGTCTTGGATCTTAGCCTTCACGTTCTCAATGGTATCGCTAGGCTCAACCTCGAGAGTG 104537 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||||||||||| |||||| Sbjct 104536 ATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 104499 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||||| || || | ||||| || ||||| || ||||||||||| ||| | || Sbjct 104177 CTGAGTCGCAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTG 104118 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| || || || || |||||||| || | ||||||||| | | ||| || Sbjct 104117 CGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATCCCC 104058 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || || ||| |||| | | | || | ||| || ||||| Sbjct 104057 TCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTAGGCTCAACCTCAAGG 103998 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || | ||||| ||||||| |||||| Sbjct 103997 GTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 103957 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || ||||| || ||||| | || | ||||| Sbjct 103940 AGCACCAGATGGAGCGTCGACTCCTTCTGGATATTATAATCACTCAGCGTGCGGCCATCC 103881 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | || || ||||| || Sbjct 103880 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 103821 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| |||| | | |||| | ||| || ||||| || || || Sbjct 103820 TGAATCTTCGCCTTCACATTCTCGATGGTGTCGCTAGGCTCAACCTCAAGCGTGATGGTC 103761 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || ||||| || | |||||| Sbjct 103760 TTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 103729 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | || || || | Sbjct 105617 CAAG-TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCAA 105559 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | ||||||||| | | ||| || ||||| || || | Sbjct 105558 GCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGA 105499 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| |||| | | | || | ||| || || || || || || |||| Sbjct 105498 TCTTGGCCTTGACGTTCTCGATGGTATCGCTAGGCTCAACCTCCAGGGTGATGGTCTTGC 105439 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||||| |||||| Sbjct 105438 CAGTCAGCGTCTTAACGAAGATCTGCAT 105411 >seq16489 Length=130489 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| |||||||| || || ||||| || ||||||||||| ||| | || | Sbjct 52080 GAGGCGGAGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 52139 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||||| || || || || | ||||||||| | | ||| || || Sbjct 52140 GCCATCCTCCAGTTGCTTCCCAGCAAAAATTAGTCGCTGCTGGTCTGGGGGGATCCCCTC 52199 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| |||| | |||| || ||| || ||||| || Sbjct 52200 CTTGTCCTGGATCTTGGCCTTGACATTCTCGATAGTGTCCGAGGCCTCCACCTCAAGGGT 52259 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| | |||||| || |||| |||||| Sbjct 52260 GATGGTCTTCCCCGTCAAAGTCTTGACAAAGATCTGCAT 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152845824669121