Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catajapyx_20aquilonaris_20[genbank_20GCA_5F000934665.1_202015-02-27] 65,951 sequences; 302,133,833 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq29144 156 1e-32 >seq29144 Length=118640 Score = 156 bits (172), Expect = 1e-32 Identities = 166/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| ||||| || || || || || || |||||||| ||||| || || Sbjct 104958 CAGATCTTCGTCAAAACGCTGACTGGCAAGACCATTACCCTCGAAGTGGA--GCCTAGCG 105015 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| ||| |||||| ||||| || || || ||||| || ||||||| Sbjct 105016 ACACCATTGAGAACGTGAAAGCAAAGATCCAGGATAAGGAGGGTATCCCCCCAGACCAGC 105075 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||| | || ||||| | ||||| ||| || ||| Sbjct 105076 AGCGCCTGATCTTCGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGAGCGACTACAACA 105135 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||| || |||||||| || ||||| || |||||||| Sbjct 105136 TCCAGAAGGAATCAACTCTCCATCTGGTGTTGAGACT 105172 Score = 149 bits (164), Expect = 2e-30 Identities = 156/203 (77%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| |||||||| || ||||| || || || ||||| |||||||| || || || Sbjct 104730 CAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGA--GCCTAGCG 104787 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||||| Sbjct 104788 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 104847 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| || ||||| | ||||| ||| || || Sbjct 104848 AGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAATA 104907 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 |||| || || || || |||||| Sbjct 104908 TCCAGAAGGAGTCGACCCTGCAT 104930 Score = 149 bits (164), Expect = 2e-30 Identities = 159/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| |||||||| || ||||| ||||| || ||||| | ||||| || || || Sbjct 105186 CAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACGTTGGAGGTTGA--GCCTAGCG 105243 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| || || ||||| |||||||| |||||||| ||||| ||||||| Sbjct 105244 ACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 105303 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| |||||||| | || || ||| || ||| Sbjct 105304 AGCGCCTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGAGCGACTACAACA 105363 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || ||||| || Sbjct 105364 TCCAGAAGGAGTCCACGCTCCATCTGGT 105391 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||| ||||| || || ||| Sbjct 105642 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCTTCCGAC 105701 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct 105702 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGACCAGCAG 105761 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||| || ||| || Sbjct 105762 CGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAACATC 105821 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 105822 CAGAAGGAGTCGACCCTCCACCTGGT 105847 Score = 127 bits (140), Expect = 5e-24 Identities = 154/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || | || || || || ||||| || ||||| || || || Sbjct 104274 CAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACTCTTGAGGTTGA--GCCGAGCG 104331 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| ||||| || || || || || || || |||| Sbjct 104332 ACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAGC 104391 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || |||||||||||||| | || || |||||| ||| Sbjct 104392 AGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGATTACAACA 104451 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || ||||| ||||| || Sbjct 104452 TCCAGAAGGAGTCTACACTTCATCTGGT 104479 Score = 122 bits (134), Expect = 2e-22 Identities = 153/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || ||||| |||||||| || || || || || ||||| || ||||| || || || Sbjct 103732 CAGATTTTTGTGAAAACCCTGACTGGCAAGACCATCACGCTTGAGGTTGA--GCCTAGCG 103789 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| || || ||||||||||| || || || || || || || |||| Sbjct 103790 ACACCATCGAGAATGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAGC 103849 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| || ||||| | || || |||||||| Sbjct 103850 AGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGTGATTATAATA 103909 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || ||||| || Sbjct 103910 TCCAGAAGGAGTCGACGCTCCATCTGGT 103937 Score = 113 bits (124), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || || || || || || |||||||| ||||| || || || Sbjct 105414 CAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTGGAGGTTGA--GCCTAGCG 105471 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | ||||||||||||||||| ||||| |||||||| || || ||||| || ||||||| Sbjct 105472 ATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAGC 105531 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | |||||||| || || ||||| || || || | || || ||| || ||| Sbjct 105532 AGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGAGCGACTACAACA 105591 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||| || || || || || || |||| || Sbjct 105592 TCCAGAAGGAGTCGACCCTTCA-CTTGGTT 105620 Score = 109 bits (120), Expect = 1e-18 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || | || || || || |||||||| ||||| || || || Sbjct 103960 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGA--GCCTAGCG 104017 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | ||||||||||| || || ||||| ||||| || || || ||||| || ||||||| Sbjct 104018 ATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCAGACCAGC 104077 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| || ||||| | || || ||| || ||| Sbjct 104078 AGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACA 104137 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || || || | || || |||||||| Sbjct 104138 TCCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGACTCAGA 104178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202714050521494