Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1427 183 4e-41 seq1105 140 4e-28 seq725 134 2e-26 seq224 104 3e-17 seq8822 89.7 6e-13 >seq1427 Length=229792 Score = 183 bits (202), Expect = 4e-41 Identities = 687/1044 (66%), Gaps = 50/1044 (5%) Strand=Plus/Plus Query 147328 GTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTT 147387 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 147388 AAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTT 147447 ||||||| ||| || |||| |||||| | ||||| ||||| || | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 147448 CATAAAAATAATAACGAGTTTGCCTTTTTTAGTAGAAACATGAAACCAGTACTCTCTTAT 147507 |||||||| ||| ||| | | ||||||| ||| | ||||| |||| || Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 147508 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCGT 147566 ||| | || ||||||| ||||| | ||||| ||| || || | | | || | | Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACT-TGAT 217546 Query 147567 ATTGGATTCTGAAATTGTTCTTGTAG--ACGAACATA-ATGTACAGCTCCCGTTTGGAAG 147623 | || ||||||||| | || ||| || || | | || || | || ||||| | Sbjct 217547 TCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 147624 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTTGTGTTTGA 147683 ||||||| | ||||| |||| | | ||| | | | | ||||| ||||||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 147684 CTGTTTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACAAACGAAGATCTTT 147743 ||| | || | ||||| ||| | | ||| ||| | | || || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 147744 TCTCAAAGATGTTATGGTCG-AGATACCCAATAGAATAGTATTCTCAGAGTTGACGAATA 147802 ||| |||| ||||| | || || | | | || ||| || || ||| ||| Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTA-AATTTTCTGAAATGA--AAT- 217782 Query 147803 TTAGTAA----CGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTA-ACAAGAAA-- 147854 ||| ||| ||| | |||| ||| ||| ||||| || || ||| || Sbjct 217783 TTATTAAAACTCGA-AAAGAATTAAATGA--TAT--GATGACATCAATATTCAAACAAGG 217837 Query 147855 ATTAGAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAGCCGGGAAAAAGAAGA 147912 |||||||||| | || ||||||| || || ||||| || | || |||||| || Sbjct 217838 ATTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAAACGACAT 217895 Query 147913 TGGTTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTA 147972 ||| | ||| | || ||| ||| | | |||||| |||||| || ||| |||||| Sbjct 217896 TGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTA 217955 Query 147973 GTAGTACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATTATGGCAGTCTTTCT 148031 || || ||||||| || | ||||| || || ||| ||||| || ||| || | ||| | Sbjct 217956 GTTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAA-GGTGGAATGATGTCAATTTTTTT 218014 Query 148032 AATGGGTTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTC----AG 148087 ||||||||| | |||| | |||| || ||| || || |||||| || | || Sbjct 218015 AATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAG 218073 Query 148088 GACATGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACA 148147 ||||| |||| ||| || ||| ||||| ||||| ||| |||||| Sbjct 218074 GACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACA 218133 Query 148148 AGGATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCCGATTTT 148206 | || || | | || || | ||||| ||||| ||||||| | ||||| |||||| Sbjct 218134 ATGA---CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTT 218189 Query 148207 G-TAGTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTT---TAC 148262 | | ||| | ||||| ||| ||| || ||||||| ||| |||||||||| || || Sbjct 218190 GTTTGTA-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAA 218248 Query 148263 ATCTTCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGAT 148322 | || ||| | |||||||| |||||||| || || |||||| | ||||| || Sbjct 218249 AGCT--GAAG-CTCATACAGC---AGGAATATCAATAAGGTTTCCTCGTGTTACTTTAAT 218302 Query 148323 TAGAGAAGATAAAACGTGGAAAGA 148346 | | | |||||||| |||||||| Sbjct 218303 TCGTTATGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 140 bits (154), Expect = 4e-28 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 52876 CCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 52935 |||||| ||||||||||||||||||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 52936 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 52995 | ||| ||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 52996 TTGTGGAATTTCCCAAATAGTTTTATA 53022 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 ||||||| |||||||| |||||||||||||||||| | ||| | | |||| || | Sbjct 85885 AATCCAGAACATTCATGAGGACACATCAACGACCACATATCATCAGCTTCAACTCTTTGC 85826 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 ||||| | ||| ||||||||||| || ||||| ||| | | | | ||| || ||| Sbjct 85825 ATAAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTT 85766 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| ||||| | ||| || || | | |||||| | |||||||||||||| ||| Sbjct 85765 CCGGTATTTTTTTTTAAATCAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATAT 85706 Query 54158 AT 54159 || Sbjct 85705 AT 85704 Score = 105 bits (116), Expect = 8e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 |||||| ||||||| || || |||| | | |||||||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 | || |||||||| ||||| || || | |||| | | ||||||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 53561 CTATGTCTCTTATTAGAGATTTCAGC 53586 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 || |||||||| || | |||||| ||||| || ||||| ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 53269 ACTATTTCTAAGACCGTA 53286 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 >seq725 Length=361488 Score = 134 bits (148), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| || |||||||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 | |||||| || | ||||| |||||||||||||| |||||||| ||||||||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 24279 ATAAGTCTTTCTCCATAACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 24335 | || | ||||||| | || | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 24336 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 24373 || |||| || || || | ||||||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 123 bits (136), Expect = 3e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 ||||||||||| ||||| || ||||| || ||||| || || |||||||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 24579 TATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 24637 | ||||| || | | || | | ||||| | | ||| || || | || ||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGT-TCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTC 98492 Query 24638 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 24697 ||| || ||||| ||||| || || || || || ||||| | |||||| ||| |||||| Sbjct 98493 TTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTC 98552 Query 24698 AATTGGAAAAATAACAAATCTATTTGGATTTT-TTGCAAGGATTGGTTC 24745 ||| |||||||| ||||| | ||||||||| | |||| | |||||| Sbjct 98553 AATGGGAAAAATGACAAAGCGTCTTGGATTTTCTCGCAA-CAGTGGTTC 98600 >seq224 Length=538787 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 53417 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 53476 |||| ||||||||| || ||||||||||| |||||||| ||||| || || | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 53477 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 53536 | | |||||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCT 53568 ||||| |||| ||| || || || | || ||| Sbjct 19566 CCTTGTACACTAATTCCTATTGGACGATATCT 19597 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 52874 CTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 52933 ||||| | |||||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 52934 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 52993 | || || || |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 52994 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq8822 Length=1639 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 54485 TACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 54544 || || || || || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 54545 ATGTGCTGAGGTCTTTC 54561 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593643993165360