Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq852 105 5e-18 seq1218 86.0 5e-12 seq2640 82.4 6e-11 >seq852 Length=358492 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | ||||| | || || ||||||||||| ||| |||||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | ||||| ||| ||| || ||||||||| | || |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || ||| | || ||||| || || ||||| |||||| || | ||| ||||||| | Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTAT--CCGATTATA 357465 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||| |||||||| |||||| |||| | || || ||||| || Sbjct 357464 ATATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 >seq1218 Length=332501 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||||||||| ||||||| |||| |||||||| ||||| ||| |||||| Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| |||||| || |||||||| | || || || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCCAAAACTATGGCCGATTAC 25211 |||| | | ||||||||||| |||||| ||||||| | | |||| | |||||| Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTAT--CGGATTAC 114225 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || || || ||||| || |||||| | || | |||| || || || Sbjct 114226 AACATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGG 114275 >seq2640 Length=94256 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 ||||| |||||| |||||||| || | ||| ||||| ||| | |||||||||| Sbjct 13301 TCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAGCAACGTCTTATCTTTG 13242 Query 25171 CGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACAATATTCAAAAGGAATC 25228 | || || || || |||||| || | || | | ||||| || |||||||||||||| Sbjct 13241 CCGGAAAGCAGTTAGAAGATGGTCGTACCCTCT--CTGATTATAACATTCAAAAGGAATC 13184 Query 25229 TACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||| |||| || ||| | |||| || Sbjct 13183 GACTCTGCACTTGGTATTGCGACTGAGAGGTGG 13151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410744446130198