Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq852 196 7e-45 seq1332 132 7e-26 seq2640 131 3e-25 seq1218 129 9e-25 seq381 118 2e-21 seq665 114 2e-20 >seq852 Length=358492 Score = 196 bits (216), Expect = 7e-45 Identities = 185/235 (79%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || |||||||||||| ||||| | ||| | | Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct 357354 GATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAG 357295 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||||||||||||||| ||||| ||||| |||| || | ||||||||| Sbjct 357294 CAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATAAT 357235 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAA 124772 || ||||| ||||| ||||||||| |||| | ||| | || ||||| |||||| Sbjct 357234 ATCCAAAAGGAATCCACTTTGCATCTGGTACTTCGTCTTCGTGGTGGAAATTAAA 357180 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || ||||| || || | || ||||| | | | Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | || || |||||||| |||||||||||||| || |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | |||||||| ||||| |||||||| ||| |||| || ||| ||||||||| Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | || ||||| | ||||| ||||||||||| Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGGTAT 357413 >seq1332 Length=188647 Score = 132 bits (146), Expect = 7e-26 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| |||||||||||||| || |||||||| || | |||||||| ||||| Sbjct 169295 AAGATTCAAGACAAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGGAAAG 169236 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| ||| |||| || ||| |||||||||||| |||||||||| || | || Sbjct 169235 CAATTAGAAGATGGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACTTCAC 169176 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| | ||||| |||| || || Sbjct 169175 TTGGTTCTTCGTTTGAGAGGAGGAAT 169150 >seq2640 Length=94256 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||||||||| || || || || || || | || | || | | | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| ||||| ||||| ||||| |||||||| || || ||||||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || ||||||||||| |||||||||||||| ||| |||| || | || ||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| || | ||| | || | | || || ||||| || Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAAT 12920 Score = 120 bits (132), Expect = 5e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||| ||||||||||| || || || |||||||| ||| | ||||| ||||| ||||| Sbjct 13293 AAAATACAAGATAAAGAGGGCATTCCCCCTGATCAGCAACGTCTTATCTTTGCCGGAAAG 13234 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || ||||| ||| |||| || | |||||||| |||||||| ||||| ||| |||| Sbjct 13233 CAGTTAGAAGATGGTCGTACCCTCTCTGATTATAACATTCAAAAGGAATCGACTCTGCAC 13174 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || | |||||||||| Sbjct 13173 TTGGTATTGCGACTGAGAGGTGGTAT 13148 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||||||||| | || ||| | || || ||||| ||||| | || | || | | Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || || | || ||| || ||||| || |||||||| || || || || Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||||||||| |||||||| |||| || | || || | |||||| || Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAA 12287 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||||||||| || || || |||||| | ||| | ||||||| Sbjct 12286 TATTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGG 12239 Score = 104 bits (114), Expect = 4e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || ||||| || || || || || ||| |||| | || | | Sbjct 12922 AATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAG 12863 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| |||| || ||||| || ||||||||||||||||| ||||| Sbjct 12862 TGACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCA 12803 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || || || || || ||||| |||| || |||| ||| | |||||| || Sbjct 12802 ACAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAA 12743 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 || |||||||| || || | ||| |||| Sbjct 12742 CATCCAAAAAGAGTCGACCCTTCATCTGGT 12713 >seq1218 Length=332501 Score = 129 bits (142), Expect = 9e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| | || || || || ||||||||||| ||| |||| ||||| | | Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| ||| | || |||||||| || |||||||| || || || || || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| ||||||||| | || || | || || || ||||| || Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAA 114227 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| || | || | ||| | | || || |||||||| Sbjct 114228 CATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGGTAT 114278 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| |||||| | || || | || ||||| || || || | || |||| ||| Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| || ||| ||||| || ||||| ||||||||||| || ||||| ||||| Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| || || || | || ||| | ||||| | ||||||||| Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAA 113999 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| || | ||||||||| | | || || ||||| || Sbjct 114000 CATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGGAAT 114050 Score = 104 bits (114), Expect = 4e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || || |||||||| | || | || | | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| ||||| |||||||| || |||||||| || || || || ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || || |||||||| || || || || || |||| || | || || ||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 ||||| ||||| || || ||||||| ||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTT 114486 >seq381 Length=560238 Score = 118 bits (130), Expect = 2e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| || |||||||| ||| | | |||||||| |||||||||||||| ||| | || Sbjct 529323 AGGTATCCCTCCTGATCAGCAACGTTTAATTTTTGCTGGAAAACAATTAGAAGATGGACG 529264 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||||| |||||||| |||||||| ||||| ||||| ||| | |||||| | ||| | Sbjct 529263 TACATTGTCTGATTATAACATTCAAAAGGAATCCACTTTACATCTTGTTTTAAGATTAAG 529204 Query 124760 AGGTGGTATTAAAAA 124774 ||||||| ||| || Sbjct 529203 AGGTGGTGCTAAGAA 529189 >seq665 Length=373109 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatA 205677 |||||||| || | | ||||| |||| | ||| |||||||| ||||||| ||| Sbjct 69570 GGATTCCATGCACTCATAATTATCCTTCTGTCATTAGGATTATTTTTAATTTTATCTATC 69629 Query 205678 ATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTA 205737 | || | |||| ||||||| |||||| | ||||| ||||| ||| |||||| Sbjct 69630 ACATCTTTTAACTGATCAATTCCTTGTCCAGAATAATCTGTATGCATTGTTTCATATTTT 69689 Query 205738 GCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 || ||| |||| | ||||||||||||||||||||| |||||||| ||| Sbjct 69690 GCTCCATAATGTCTCCATTGAAAACCATAAACTGGCCCTAAATCTCCT 69737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755357252457600