Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2640 122 8e-23 seq1218 107 2e-18 seq852 107 2e-18 >seq2640 Length=94256 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| || | || |||||||||||||||||||||||| | ||||| ||| || Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTC 13455 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | ||||| || ||| |||| ||||| |||||||||||||| || || |||||||| Sbjct 13456 CAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTG 13515 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | ||||| ||||| | ||||| || | ||| | || || Sbjct 13516 GATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTT 13575 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||||||||| Sbjct 13576 ACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | ||||| || | || ||||||||||| ||||||||||| Sbjct 12693 TACCGCCACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTG 12752 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| || || |||||||| || ||| |||| ||||| || |||||||| | Sbjct 12753 ACAGTGTGCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTG 12812 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 |||| || || ||||| ||| || || || | ||||| ||||| || ||| | Sbjct 12813 GTATACCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCA 12872 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || ||||| || ||||| || || |||||||| Sbjct 12873 CTTCTAAAGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | ||||||||||||||||| | || |||||||| || || ||||| || | Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| || || ||||| || || || | || || | ||| ||||| ||||| Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| || |||||| |||||| || || | ||| | ||||| | ||| || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || || || ||||||||||| |||||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || ||||||| || | |||| ||| || ||||| |||||||| || || | Sbjct 12923 CCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGAC 12982 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || | ||||||||||| | || || | ||| ||||| ||||| Sbjct 12983 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGA 13042 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || |||||| |||||| ||| || | |||| ||| || | ||| || Sbjct 13043 ATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCACT 13102 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | || || || ||||| || ||||| ||||||||||| Sbjct 13103 TCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | | || ||| |||||||| | || || || ||||||||||| ||||| Sbjct 13149 TACCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAG 13208 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || ||| || | ||| ||||| || |||| ||||| |||||||| || | Sbjct 13209 AGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGG 13268 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||| || ||| |||||| || || | ||| | ||||| | ||| | Sbjct 13269 GAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTA 13328 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || ||||| |||||||| ||||| |||||||| Sbjct 13329 CTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||||||||| |||||||| | ||||| || || Sbjct 12257 ACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCGTCTTCT 12316 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||| || | || || | |||||| || ||||| || || ||||||||| Sbjct 12317 AGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGT 12376 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | |||||| || | || | ||||| Sbjct 12377 ATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACTTCCAGTGTTATTGTTTTA 12436 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| || || || ||||| Sbjct 12437 CCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | ||||| || | || | ||| |||||| || || || |||||| | Sbjct 13607 CCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGAC 13666 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||||| || || | || |||||||| |||| | | |||||||||||| || Sbjct 13667 AGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGA 13726 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGAC 118690 || |||||||||||| |||||| || || | |||| || || | || | || || Sbjct 13727 ATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGT-TCCAC 13785 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || |||| ||||| || || |||||||| Sbjct 13786 TTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCAT 13833 >seq1218 Length=332501 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||| | || | ||| | || || ||||| || ||||||||||| Sbjct 114277 TACCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCG 114218 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| || || || |||||||| || |||| | ||| || || ||||||| Sbjct 114217 ATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAG 114158 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| || ||||| |||||| ||||| | ||| | || || || || | Sbjct 114157 GAATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAA 114098 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | |||||||| ||||||||||| ||||| || ||||| Sbjct 114097 CTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || || ||||| || || ||||| |||||| ||||| Sbjct 113795 TGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCAAGCTGC 113736 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || || ||||||||||||||||||| || || || || ||||| ||| ||||| Sbjct 113735 TTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTG 113676 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||| || | || | ||||| || ||| ||||| | || | || || || ||| Sbjct 113675 GCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCCGTC 113616 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || |||||||||||||| Sbjct 113615 AGGGTCTTCACAAAAATCTGCAT 113593 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||||| || ||||||||||| || || || || |||||||||||| Sbjct 113446 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGC 113387 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || || |||||||||||||||||||||| || || || ||||| || || || Sbjct 113386 TTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTA 113327 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||| || | ||| | || || | ||| ||||| | || | ||||| || || Sbjct 113326 GTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTT 113267 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 | || || || || ||||||||| Sbjct 113266 AATGTCTTAACGAAGATCTGCATG 113243 >seq852 Length=358492 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| ||||| |||||||| ||||| || |||||| || ||| Sbjct 357890 ACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCG 357949 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || ||||| ||| | || | | ||| || ||||| || ||||| || |||||| | Sbjct 357950 AGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGA 358009 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| ||| || | |||| ||||| | ||| ||||| | || | || || Sbjct 358010 ATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTTC 358069 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| || ||||||||||| Sbjct 358070 CCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| ||||||||||| || |||||| | ||||| ||| || Sbjct 357434 ACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCT 357493 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | || ||||| || | || | | ||| |||||||| ||||| || || |||||| | Sbjct 357494 AATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGA 357553 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | ||| | ||| || || || || || | || | ||||| Sbjct 357554 ATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTT 357613 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| ||||| || ||||| Sbjct 357614 CCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || ||||| | |||||| |||| ||||| || || || ||||||||||| | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||||| | |||||| || || | || | |||||||| || || || Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGAC 118690 || || ||||| || ||||| || || | ||||| || || | || | || || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGT-TCTAC 357822 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | || | ||||| || || | || || || ||||||||||| Sbjct 357823 CTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433775110620244