Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1287 114 1e-20 seq3093 113 5e-20 seq292 113 5e-20 seq2260 111 2e-19 seq2640 109 6e-19 seq2025 104 3e-17 seq1218 100 3e-16 seq1693 91.5 2e-13 seq852 87.8 2e-12 >seq1287 Length=205155 Score = 114 bits (126), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 185187 AAAAATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 185246 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 185247 TGACCACTATACTACCGAGGA 185267 >seq3093 Length=77097 Score = 113 bits (124), Expect = 5e-20 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 71797 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 71738 Query 60117 TCACCACTATACTACCGAGGATTGA 60141 | |||||||||||||||||||| || Sbjct 71737 TAACCACTATACTACCGAGGATCGA 71713 >seq292 Length=578259 Score = 113 bits (124), Expect = 5e-20 Identities = 78/87 (90%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||| |||||| ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 297451 AAATATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 297510 Query 60116 CTCACCACTATACTACCGAGGATTGAA 60142 || ||||||||||||||||||| |||| Sbjct 297511 CTGACCACTATACTACCGAGGACTGAA 297537 >seq2260 Length=179467 Score = 111 bits (122), Expect = 2e-19 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 |||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 35625 TTTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 35566 Query 60122 ACTATACTACCGAGGATTG 60140 |||||||||||||||| || Sbjct 35565 ACTATACTACCGAGGACTG 35547 >seq2640 Length=94256 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| || | ||||||||| || | ||| ||| || || |||||||| || | Sbjct 12466 TCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGA 12525 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| ||||||||||| || || ||||| || | ||| || || | || Sbjct 12526 CAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGG 12585 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || || ||||| |||||| || | | | | ||||| |||| || || Sbjct 12586 AATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTAC 12645 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || ||||| || || ||||||||||| ||||| Sbjct 12646 TTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| | ||||| ||||| || || ||| || ||||||||||||||||| | Sbjct 12238 TCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGA 12297 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| |||||||| || || || || || |||| ||||||||| | || Sbjct 12298 AAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGG 12357 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| || || |||| || | | |||||| |||| || || Sbjct 12358 AATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGAC 12417 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | || || ||||| || || | || || || || ||||||||| Sbjct 12418 TTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCATT 12466 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||||| ||||| |||| || ||||||||||| || ||||||| Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||| |||||| || || || || || || ||||| || | || Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||| || || |||||| |||| | | | ||||| |||| || || Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||||| || || || || || || |||||||| |||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 >seq2025 Length=256430 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 72007 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 71948 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 71947 TACTACCGAGGA 71936 >seq1218 Length=332501 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | | | || ||||||| || ||| || ||||||||||| || | Sbjct 114504 TCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGA 114445 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || |||| || | |||||| || || || || |||| ||| ||||||| ||| Sbjct 114444 AAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGG 114385 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || || |||||| ||| |||| | ||| | | | | |||||||| | || | Sbjct 114384 AATGCCTTCTTTGTCC-TGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTA 114326 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | || || || || || || ||||| || ||||| |||||||| Sbjct 114325 CTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 >seq1693 Length=272196 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/77 (86%), Gaps = 7/77 (9%) Strand=Plus/Plus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 ||||||||| |||| |||||||| |||||||||||||||||||| |||||||| Sbjct 187440 ATTTTCTCCCCGGCGGGGAATCG-------GTCTCCCGCGTGACAGGCGGGGATACTCAC 187492 Query 60121 CACTATACTACCGAGGA 60137 ||||||||||||||||| Sbjct 187493 CACTATACTACCGAGGA 187509 >seq852 Length=358492 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | || ||||| || || |||||||| | || ||| || |||| || Sbjct 357661 CACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTC 357720 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 || ||| ||||| || || || | ||||||||||| | ||| | | ||||| ||| Sbjct 357721 TAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTG 357780 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| || | | | | || ||||| | ||| || || | || |||||||| Sbjct 357781 GATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTTT 357840 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || |||| ||||| || || || |||||| Sbjct 357841 TCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571742856291960