Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1427 138 1e-27 seq725 118 1e-21 >seq1427 Length=229792 Score = 138 bits (152), Expect = 1e-27 Identities = 471/715 (66%), Gaps = 47/715 (7%) Strand=Plus/Plus Query 121296 TTGTTTATTTGTCTTTGATTGTTTATTTTACAAT--AATGTAAGTT-TAATAAGTTTACC 121352 |||||||||||| ||||||||| ||| ||||||| || ||| | |||| || || Sbjct 217649 TTGTTTATTTGTGTTTGATTGTATATATTACAATGGAA---AAGATCTAATGGATTGTCC 217705 Query 121353 ATTTGTTAATAGGAGAAAAATTATTGTTGATAATATCAATGAAATAAAAAATAAGGTTAT 121412 || | || |||||||| | || ||||| | ||| | ||| || | ||| Sbjct 217706 TCTTAAAGAAAGACGAAAAATTCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAA 217765 Query 121413 GGTGTCAGAA--GCATTTTATGTGTATAAA--GAAGATGATTTAAATAAAATAATGGATG 121468 | || ||| | | ||||| || || ||| | || |||||| | || |||| Sbjct 217766 ATTTTCTGAAATGAAATTTAT---TAAAACTCGAAAA-GAATTAAATGATAT----GATG 217817 Query 121469 ACGT---TATTaaaaaaaa-aTTAGAAGGGTTGATATTAAAAGGAATAAATATCGA--TT 121522 || | |||| ||| || ||||||||| | | ||||||| || || | || Sbjct 217818 ACATCAATATTCAAACAAGGATTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTT 217875 Query 121523 ATGTACCTGGAAAAAGAGGTTGGTTAAAGATGAAGAAGGATTACTTAGATGATGGATCCA 121582 || |||||||||| || |||| | || | || || ||||| | |||| || || Sbjct 217876 ATAAACCTGGAAAACGACATTGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCA 217935 Query 121583 TGGCAGATTCTGCAGACTTAGTAGTTTTAGGATCATATTACGGTAAAGGGTCTAAGGGTG 121642 |||| || |||||| ||||| |||||||| |||||| |||| || ||| |||| Sbjct 217936 TGGCTGACAGTGCAGATTTAGTTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAAGGTG 217995 Query 121643 GTGCGCCATCAATATTTTTAATGGGGTGCTATGATAATGAAAGTAATAATTGGAAAACGG 121702 | | ||||| ||||||||||| |||| ||||| | | || ||| || | Sbjct 217996 GAATGATGTCAATTTTTTTAATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAG 218055 Query 121703 TAACTAAATGCTCTGGCCACGACGA--TGACACA---TTaaaaaaagtacaaaaagaaat 121757 | |||||| ||| | ||| ||| || ||| ||||| |||||| |||| | Sbjct 218056 TTACTAAAGTACATGG--AGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATT 218113 Query 121758 agagtttttaaaaattagtaaagatacaaaaaaaatcccaaaaTGGTTAATAGTAGATAA 121817 ||| | | ||| ||| || || ||| | | |||| | ||||||| || | || Sbjct 218114 AGACATGGTGAAAGTTAACAATGACACAGATA---TCCCTCATTGGTTAAACGTTAA-AA 218169 Query 121818 AATATATTAT-CCAGATTTTGTAGTTTGT---GATCCaaaaaaaTCACAGGTGTGGGAAA 121873 ||| | | || ||||||||| |||||| |||||||||| ||||||||| ||||| | Sbjct 218170 AATCTTTAATTCCAGATTTT---GTTTGTAAAGATCCAAAAACATCACAGGTATGGGAGA 218226 Query 121874 TATCGGGATCTAGTTTTACAAAATCGATACATCACACAGCAGATGGGATTTCGATAAGAT 121933 | | ||| | ||| | ||| | | ||| |||||| || || || ||||| | Sbjct 218227 TTGCAGGAGCAGAATTTTCTAAAGCTGAAGCTCATACAGCA---GGAATATCAATAAGGT 218283 Query 121934 TTCCTAGATTTaaaaaaaTTAGATATGATAAAAATTGGTTATCGGCTACAAGTTT 121988 ||||| | ||| |||| | |||||||||| |||| | ||| |||| ||| Sbjct 218284 TTCCTCGTGTTACTTTAATTCGTTATGATAAAACTTGGAAAGAGGCAACAACTTT 218338 >seq725 Length=361488 Score = 118 bits (130), Expect = 1e-21 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287 |||||||| || || | ||| || ||||||||||| ||||| | || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14347 |||||||| ||||| || || ||||| |||||||| ||||| || ||||| ||||| || Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 14348 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTC-GATATCCATTTTCTAGCCCATTCAGA 14406 | | ||||||||||| | || | | || |||||| ||| | ||||| |||| Sbjct 94866 ACAACACGTTCTCCAAATG-TGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGC 94924 Query 14407 tttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 |||| |||| | | | ||| || || ||||||||||| Sbjct 94925 TTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAATAA 94966 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 ||||||||||||| ||||| ||||||||||| ||||| || || |||| | ||||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 14649 A---GTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTA 14705 | | || || ||||| ||| || ||||| | | |||||| ||||| || | Sbjct 98432 AATGCTTTTCATCATCATTCAAGAG---TTCCCAATGAGAAAGATCCTTTGAAAGGTCAA 98488 Query 14706 CTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTAT 14765 |||| ||||| ||||| || ||| ||||||| || ||||| ||| || || || Sbjct 98489 CTTCTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGAT 98548 Query 14766 ATAATATAGGAAAAACTACAAA 14787 || || ||||||| ||||| Sbjct 98549 ATTCAATGGGAAAAATGACAAA 98570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482282551400760