Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2640 141 8e-29 seq725 140 3e-28 seq852 107 2e-18 seq1218 104 2e-17 seq752 84.2 2e-11 >seq2640 Length=94256 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || || |||||| | || || |||||| Sbjct 13605 ATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAGT 13546 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| ||||| | ||| |||||||||||| | || ||||| ||| Sbjct 13545 GACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCAG 13486 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || ||||| |||||||| | || | |||||| ||| Sbjct 13485 CAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAAC 13426 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||||||||||| ||||| ||||||||||| || || || Sbjct 13425 ATTCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCT 13388 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || || || || ||||| | || || || || Sbjct 12921 ATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAGT 12862 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||||| || || | || |||||| ||||| | || ||||| || Sbjct 12861 GACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCAA 12802 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || |||||| | |||||| | || || ||||| ||| Sbjct 12801 CAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAAC 12742 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct 12741 ATCCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGACTTCGTGGCGGTA 12693 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||||||||| ||||| || || || |||||| | || || || ||| Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || ||| | ||| ||||| ||||| | || || || || Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| ||||| || ||||| | ||| || || |||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| |||||||| || || ||||| ||||| ||| || | || || Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGG 12923 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||||| || || || || ||||| | || || || ||| Sbjct 13377 ATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAGT 13318 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| ||||| | |||| || || || ||| | || || || ||| Sbjct 13317 GACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAG 13258 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || || || ||||| ||||| | || | ||||||||| Sbjct 13257 CAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAAC 13198 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||||||||| || ||||| | ||||||| || |||| Sbjct 13197 ATTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGGTA 13149 >seq725 Length=361488 Score = 140 bits (154), Expect = 3e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 57503 GTCCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATA 57562 ||| ||||||||||| |||| ||| ||||| | | |||||||| ||||| |||||||| Sbjct 98607 GTCAGATGAACCACTGTTGCGAGAAAATCCAAGACGCTTTGTCATTTTTCCCATTGAATA 98548 Query 57563 TCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGT 57622 ||| || || ||| | |||||||| || || ||||| || || ||||| || |||||||| Sbjct 98547 TCCTGATATCTGGCAGATGTACAAGAAAGCTGAAGCTTCATTCTGGACGGTTGAAGAAGT 98488 Query 57623 AGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTAT 57682 ||||| || |||||||| ||||||| | | || || ||| | ||||||| Sbjct 98487 TGACCTTTCAAAGGATCTTTCTCATTGGGAACTCTTGAATGATGATGAAAAGCATTTTAT 98428 Query 57683 TAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 | || || || || || || || || ||||| || || || || |||||||| Sbjct 98427 TTCTCATGTATTAGCTTTCTTTGCTGCTAGTGATGGCATAGTAAATGAAAATTTGGT 98371 >seq852 Length=358492 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| | || || ||||| || || | || || ||||| | Sbjct 357870 ATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAGC 357811 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||||| || || | ||| ||| |||||||| | ||||| |||||| Sbjct 357810 GATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCAG 357751 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || || || || |||||||| || ||| | ||| || ||||| ||| Sbjct 357750 CAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAAC 357691 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || || ||| |||| |||||| || | || || Sbjct 357690 ATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATTGCGTGGTGG 357644 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| || ||||| || || || || || || | || || || || Sbjct 358101 AAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCA 358042 Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| |||| | || ||| || ||| | | |||| |||||| | |||||||| Sbjct 358041 AGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAG-ACAAAGAAGGCATTCCGCCCGA 357983 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| ||| | | || ||||| || || || | |||||| | ||| || ||||| Sbjct 357982 CCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTA 357923 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| |||||||| || |||||| |||| ||| | |||| || || Sbjct 357922 TAACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGG 357872 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || || ||||| || || | || |||||||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| ||||| || ||| | | |||| ||||| | |||||||| || Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAG-ACAAAGAAGGTATACCGCCCGATCA 357524 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | |||| || || || || || || ||||| | || | ||||||||| Sbjct 357523 ACAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAA 357464 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || ||||| |||||||| | || | || |||| Sbjct 357463 TATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGGTA 357414 >seq1218 Length=332501 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || || || || || | || || || || | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| |||||| | ||||||||||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || |||||||||||| | ||| | ||| || || Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| ||||| || ||| | || || |||||||| || || Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGG 114503 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || |||| ||||| || || ||| | || ||||| || Sbjct 113821 ATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAGT 113880 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || ||| | || ||| || ||||| | || || || || Sbjct 113881 GATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCAA 113940 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| ||| ||||||| || || ||||||||| Sbjct 113941 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAAC 114000 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAG 31407 ||||| ||||||||||| |||||| |||| ||||| Sbjct 114001 ATTCAGAAAGAATCGACACTTCATTTGGTTCTTAG 114035 >seq752 Length=274741 Score = 84.2 bits (92), Expect = 2e-11 Identities = 171/249 (69%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| |||||||| |||| ||| ||| | | ||| || | ||| ||||| |||||| Sbjct 123993 TCTTGATCCACTGTGAACTTTATTGCGCTCGAAATCGGCTTAGAGCGCAGATAGTACATG 123934 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || |||||||| || |||||| ||| || || ||||||| ||| | || || Sbjct 123933 CCTGTCTTCAGGCCGCGCTTCCAGCAGTAGAAGTGCATCGACGATAATGATTGGTACGTC 123874 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACG-CTCCTCGATCGGC 22281 || |||||| | | |||| |||||| ||| | || ||| | || | | || || Sbjct 123873 GGGCGCTCCATGAATATGTTGAGCGACTGCGACTGGTTGACAAATGGCTGC-CTATTCGC 123815 Query 22282 GGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGAT 22341 |||||| | | | | |||||| | ||||||||||||||||||| | | | || Sbjct 123814 GGCCATGTCCACGACGCTCCGCATCTTGTTCACCCATACGGTCTTGTACAGCTCCTTCAT 123755 Query 22342 C--TCTAAC 22348 | |||||| Sbjct 123754 CTATCTAAC 123746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445708132759440