Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1427 192 7e-44 seq1105 131 2e-25 seq725 116 5e-21 seq224 104 3e-17 seq8822 95.1 2e-14 seq546 84.2 3e-11 >seq1427 Length=229792 Score = 192 bits (212), Expect = 7e-44 Identities = 682/1040 (66%), Gaps = 42/1040 (4%) Strand=Plus/Plus Query 155251 GTTATGACTCCAATTAATCCCATGTTAGCGGAATCATGTGATTCTGTCAATAAGGCGTTT 155310 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 155311 AAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTT 155370 ||||||| ||| || |||| ||| || | ||||| ||||| ||| | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 155371 CATaaaaaaaaTAACGAGTTTGCATTCTTTAGTAGAAACATGAAACCAGTACTCTCTCAT 155430 ||||||||| ||| ||| ||| |||||| ||| | ||||| |||| ||| Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 155431 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTAC-GTCTATCGT 155489 ||| | || ||||||| ||||| | ||||| ||| || ||| | | || | Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACTTGATT 217547 Query 155490 ATTGGATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTACCGTTTGGAAG 155546 ||| | ||||||||| | || |||| | || | | || ||| | || ||||| | Sbjct 217548 CTTG-ACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 155547 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 155606 ||||||| | ||||| |||| | | ||| | | | | ||||| || |||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 155607 CTGTTTATACTTTGATGGATTCGATATGACAGACATTCCATTGTATGAACGAAGATCTTT 155666 ||| |||| | ||||| ||| | | || ||| | | ||| || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 155667 TCTCAAAGATGTTATGGTCGAAATACCCAATAGAATAGTATTCTCAGAGTTGACGAATAT 155726 ||| |||| ||||| ||| | || || ||| || || ||| ||| | Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGA--AAT-T 217783 Query 155727 TAGTAACGAGTCTCAG----TTAACTGATGT-ATTAGATGA-TGCACTAACGAGAAAATT 155780 || ||| | || | |||| |||| | || | || | | | ||| || | || Sbjct 217784 TATTAAA-ACTCGAAAAGAATTAAATGATATGATGACATCAATATTCAAACAAGGA--TT 217840 Query 155781 AGAAGGATTGGTCTTAAAAGAT--ATTAATGGCGTATACGAACCGGGAAAGAGAAGATGG 155838 ||||||| | || ||||||||| ||| | | |||| |||| ||||| || ||| Sbjct 217841 AGAAGGACTTGTTTTAAAAGATCCATTGAGTACTTATA--AACCTGGAAAACGACATTGG 217898 Query 155839 TTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTA 155898 | ||| | || ||| ||| | | |||||| |||||| || ||| |||||||| Sbjct 217899 CTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAGTT 217958 Query 155899 GTACTAGGTGCCTACTATGGTAAAGGAGGAAAGGGTGGTATCATGGCAGTCTTTCTAATG 155958 || ||||||| || | ||||| || | || ||||| || ||| || | ||| ||||| Sbjct 217959 GTTTTAGGTGCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAATTTTTTTAATG 218018 Query 155959 GGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCC----GGTCA 156014 ||||| | ||| | |||| || ||| || || |||||| || | || || Sbjct 218019 GGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGGACA 218077 Query 156015 CGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAGGA 156074 |||| ||| || ||| ||||| ||||| ||| ||||||| || Sbjct 218078 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAATGA 218137 Query 156075 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTGTA- 156132 || | | || || | ||||| ||||| ||||||| || |||| |||||||| Sbjct 218138 ---CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTGTTT 218193 Query 156133 GTAGATGATCCGAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTAC---ATCT 156189 ||| | ||||| ||| ||| ||| ||||||| ||| |||||||||| ||| | | || Sbjct 218194 GTAAA-GATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAAGCT 218252 Query 156190 TCCAAGTCACATACAGCGAATGGAATATCAATTAGATTTCCTAGATTTACTAGGATTAGA 156249 ||| | |||||||| ||||||||||| || |||||| | ||||| ||| | Sbjct 218253 G--AAG-CTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTCGT 218306 Query 156250 GAAGATAAAACGTGGAAAGA 156269 | |||||||| |||||||| Sbjct 218307 TATGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 131 bits (144), Expect = 2e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 62114 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 62173 |||||| |||||||||||||| |||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 62174 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 62233 | ||| ||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 62234 TTGTGCAATTTCCCAAATAGTTTTATA 62260 ||| | |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 63216 AATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63275 |||| || |||||||| |||||||||||||||||| | ||| | | |||| || | Sbjct 85885 AATCCAGAACATTCATGAGGACACATCAACGACCACATATCATCAGCTTCAACTCTTTGC 85826 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 ||||| | ||| ||||||||||| || ||||| ||| | | | | ||| || ||| Sbjct 85825 ATAAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTT 85766 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || ||||| ||||| | ||| || || | | |||||| | |||||||||||||| ||| Sbjct 85765 CCGGTATTTTTTTTTAAATCAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATAT 85706 Query 63396 ATGGC 63400 || || Sbjct 85705 ATAGC 85701 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 |||||| ||||||| ||| || |||| | | ||||||| |||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 | || |||||||| |||||||| || | |||| | | ||||||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 62799 CTATGTCTCTTATTAGAGATTTCAGC 62824 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446 ||| || ||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506 ||| |||||||| || | |||||| ||||| || ||||| ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 62507 ACTATTTCTAAGACCGTA 62524 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 >seq725 Length=361488 Score = 116 bits (128), Expect = 5e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || |||||||| ||| || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33725 | |||||| || | || || ||||| ||||||||||||||||| ||||| ||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 33726 ATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 33782 | || | |||||| | || | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 33783 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820 || |||| || || || | || ||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 116 bits (128), Expect = 5e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| ||||| |||||||| || ||||| || || |||||||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 34026 TATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 34084 | ||||| || | | || | | ||||| | | ||| || || | || ||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGT-TCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTC 98492 Query 34085 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 34144 ||| || ||||| ||||| || || || || || ||||| | |||||| ||| |||||| Sbjct 98493 TTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTC 98552 Query 34145 GATTGGGAAAATAACAAATCTATTTGGATTT 34175 || || ||||| ||||| | |||||||| Sbjct 98553 AATGGGAAAAATGACAAAGCGTCTTGGATTT 98583 >seq224 Length=538787 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714 |||| || |||||| || ||||||||||| |||||||| |||||||| || | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 62715 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62774 | | |||||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCT 62806 ||||| |||| ||| || || || | || ||| Sbjct 19566 CCTTGTACACTAATTCCTATTGGACGATATCT 19597 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 62112 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 62171 ||||| | |||||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 62172 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 62231 | || || || |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 62232 TTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 ||||| | |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq8822 Length=1639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || || ||||| || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 63783 ATGTGCTGAGGTCTTTC 63799 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 86/112 (77%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 28712 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 28771 ||||||||||| | |||||||||||| || || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 28772 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 28820 |||||||||||| || ||||| | ||| ||| || | ||||||| || Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAAT 78898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629735274966960