Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1427 147 2e-30 seq725 141 9e-29 seq224 120 3e-22 seq1105 105 6e-18 seq8822 93.3 4e-14 >seq1427 Length=229792 Score = 147 bits (162), Expect = 2e-30 Identities = 651/1015 (64%), Gaps = 47/1015 (5%) Strand=Plus/Plus Query 119755 GCTTTTGAAAAGTATACAAATGGATTATATGCAGAAATAAAATACGATGGTGAACGCGTT 119814 || ||| |||| | |||| || | ||||| || || ||||| ||||| ||||| ||| Sbjct 217362 GCCTTTAAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTT 217421 Query 119815 CAAATTCATAAACAAAATAATACTTATGTATATTACAGTAGAAACCTAAAACAAGTATCT 119874 ||| |||||||| || |||||||| | ||||| ||| ||| |||||| ||| | Sbjct 217422 CAAGTTCATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTA-CA 217480 Query 119875 ACAT-ATAAAATAGAGGGGTTCGATGATTGTTTATCTAAAGCTTTTCCAACGGCTAAAAA 119933 ||| |||||||| ||| | ||| || |||||||||||| | | ||| | Sbjct 217481 ACAGCATAAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGA 217540 Query 119934 CTTTATTTTAGATGCAGAACTTATATTAGTGGATaaaaaaaCAAATAACTTTTTGCCGTT 119993 ||| ||| | || | ||| || | || | |||| ||||||| |||| ||||| || Sbjct 217541 CTTGATTCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATT 217600 Query 119994 TGGTTCATTAGGAGTACATAAAATGGCTTCGTATGAAAATTCTAGTCGATGTTTATTTAT 120053 |||| | ||||| || || || | | || | | | | || | | | ||||||||| | Sbjct 217601 TGGTACTTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGT 217660 Query 120054 ATTTGATTGTTTGTATTTTAACGATG--AAAG-TATTATACACAAACATTTTATTAAACG 120110 ||||||||| | |||| || ||| |||| | | || | | | ||| || | Sbjct 217661 GTTTGATTGTATATATT---ACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAG 217717 Query 120111 TAGACAATTAATCAGGGATAATATTTATGAAATTAGACATAAAATAATGCTATCCGATAT 120170 || || | | || ||||| | ||| ||| | || | || | | || || || Sbjct 217718 ACGAAAAATTCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAAT 217777 Query 120171 ACGTTGTATTAATAAAAAAGATGAATTAGATACATTTATAAAAGATGTTATACAAA-AGG 120229 | |||||| | | | |||||| || | || | | ||| |||| | | Sbjct 217778 GAAATTTATTAAAACTCGAAAAGAATTAAATGATATGATGACA-TCAATATTCAAACAAG 217836 Query 120230 GGCTGGAAGGACTCGTATTAAAAGGATTATATGA-TTCATATAAACCAGGAAATAAAGGT 120288 | | |||||||| || |||||| ||| ||| | | |||||||| ||||| | | Sbjct 217837 GATTAGAAGGACTTGTTTTAAAA-GATCCATTGAGTACTTATAAACCTGGAAAACGACAT 217895 Query 120289 TGGTTGAAAATAAAGAAGGATTATATACTAAATGGATCTATAGCGGATTCCGTTGATTTA 120348 ||| ||||| | || || |||||| | | | || || || || | |||||| Sbjct 217896 TGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTA 217955 Query 120349 GTTGTGTTAGGATCATACTATGGAAAAGG--GTCAAGGGGCGGCATTCAATCAATATTCT 120406 ||||| ||||| |||| | ||| | || || || || || || ||||| || | Sbjct 217956 GTTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAA--GGTGGAATGATGTCAATTTTTT 218013 Query 120407 TAATGGGATGTTACG-------ATCCCAACGATTGTAAATGGAAAACGGTTACAAAATGT 120459 ||||||| || | || ||||||| || ||| || ||||| ||| || Sbjct 218014 TAATGGGTTGCTTCGATAAGACATCCCAA-------AAGTGGTGTACAGTTACTAAA-GT 218065 Query 120460 TC----AGGTCATGATGAAGAAACTCTAAAACAAATACAAGAGGAACTAGATGTTATTAA 120515 | ||| ||| ||| | | | || || || ||||| ||| |||| | | || Sbjct 218066 ACATGGAGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAA 218125 Query 120516 AATCAGTAAGGATGCATCGAAAATACCTAAGTGGTTAACTATAAATAAAGCATATTATCC 120575 | | ||| ||| | | || ||| | ||||||| | || ||| | | ||| Sbjct 218126 AGT---TAACAATGACACAGATATCCCTCATTGGTTAAACGTTAAAAAATCTTTAATTCC 218182 Query 120576 TGATTTTATTGTTAAAGATCCTAGATCTTCCCCGGTATGGGAAATTACGGGATCTGGTTT 120635 |||||| || ||||||||| | | | || | ||||||||| ||| | ||| | | || Sbjct 218183 AGATTTTGTTTGTAAAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATT 218242 Query 120636 TACATCTTCAAGTCAA---CATACAGCAAATGGAATATCTATACGTTTTCCTAGATTTGC 120692 | ||| | | || ||||||||| |||||||| ||| | |||||| | || | Sbjct 218243 T---TCTAAAGCTGAAGCTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTAC 218296 Query 120693 AAGAATAAGAAATGATAAAAATTGGATATCTGCAACAAATCTACAAGAGTTGGAA 120747 ||| | ||||||||| ||||| | ||||||| | || ||||||||||| Sbjct 218297 TTTAATTCGTTATGATAAAACTTGGAAAGAGGCAACAACTTTAGAAGAGTTGGAA 218351 >seq725 Length=361488 Score = 141 bits (156), Expect = 9e-29 Identities = 167/225 (74%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| ||||| || |||| ||||||| ||||||||||| ||||| | || | |||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 ||| |||||| || || ||||| || ||||||||||| ||||| || || || ||||||| Sbjct 94804 TTAACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATG 94863 Query 11772 CTACTACTCTTTCTCCATATACCTTGTTGCTAGA-----TATCCATTTTCTGGCCCAATC 11826 | || || | ||||||| || | | | ||| |||||| ||| | ||||| || Sbjct 94864 CAACAACACGTTCTCCAAAT--GTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTC 94921 Query 11827 AGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871 |||||| |||| ||||| | ||| ||||| || |||||||| Sbjct 94922 AGCTTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAATAA 94966 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAG 12073 ||||| |||||||| || |||||||||| ||||| || |||| || ||| ||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 12074 TATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCT 12133 | ||||| || | | | || ||||||| | | ||| ||||| | || |||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTCT 98493 Query 12134 TCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTA 12193 ||||| ||||| || || | | || || ||||| | |||||||||| |||| | | Sbjct 98494 TCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTCA 98553 Query 12194 ATAGGGAAAATAACGAA 12210 || || ||||| || || Sbjct 98554 ATGGGAAAAATGACAAA 98570 >seq224 Length=538787 Score = 120 bits (132), Expect = 3e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 36861 TCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATAT 36920 |||||| | ||||||||||||||||||| ||| | || |||||| | | |||||| Sbjct 7559 TCTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATAT 7618 Query 36921 TGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACA 36980 | || || || |||||||| ||||| |||||||| || || ||||||| | ||| Sbjct 7619 ACTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTAC 7678 Query 36981 TTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGG 37031 |||||| | ||| |||||||| ||| |||||| |||| | || |||||| Sbjct 7679 TTTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGG 7729 >seq1105 Length=277015 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 37366 GGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCT 37425 ||||| | | |||||| |||||| || | ||| |||||||| ||||| | || | Sbjct 91318 GGAGATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGT 91259 Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTA 37485 | || |||||| |||||||| || ||||||||||| ||| | | ||||| || || Sbjct 91258 AATGAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTG 91199 Query 37486 TCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATG 37545 || || | ||| | || | ||||| ||| || || || |||||||| || |||||| Sbjct 91198 TCAAACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATG 91139 Query 37546 GGTCTATGTTTCTTATTAGAT 37566 || | ||| ||| ||||||| Sbjct 91138 GGACGATGCCTCTGATTAGAT 91118 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/163 (73%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 36860 ATCT-CCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATAT 36918 |||| |||||| |||||||||||||| || | ||| | || | || | | |||| Sbjct 102661 ATCTGCCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGA 102602 Query 36919 ATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATA 36978 || | | || ||||||||||| || || || || ||||| || ||||| | | ||| Sbjct 102601 ATGTTTAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATG 102542 Query 36979 CATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTA 37021 ||||||||| ||| |||||||| ||| |||| | || ||||| Sbjct 102541 GATTTTTGAGGTATTTCCCAAACAGTTCTATACAGTTTTTTTA 102499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 37928 TATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGAC 37987 ||||||| | | ||| || || ||||| || ||||||| | |||||| |||| Sbjct 85923 TATATAACTCTTCAAATTCTTTACCCCAACTGTCAAATAATCCAGAACATTCATGAGGAC 85864 Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047 |||| | ||||| ||||| ||| || | || |||||||||||| || | ||| | Sbjct 85863 ACATCAACGACCACATATCATCAGCTTCAACTCTTTGCATAAATAAATCGGGAATCCAAA 85804 Query 38048 ATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTA 38107 |||| ||||||||| | | | ||||||| || || ||| ||| |||| | Sbjct 85803 GTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCCGGTATTTTTTTTTAAATCAA 85744 Query 38108 GAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCT 38165 |||| || || ||||| || ||||| ||||| | ||| || | | || || ||||| Sbjct 85743 GAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATATAGCAAAGGCACCGGGTCT 85686 >seq8822 Length=1639 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/182 (71%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 38392 CTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAAC 38451 || |||| |||||| || ||||| || ||||| | ||| || || ||||| | ||| Sbjct 915 CTCGACAATTGAGGTTTAGGTGTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAAC 974 Query 38452 CATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATA 38511 |||||||| || || | ||||||||||| ||| || |||| || || | || || Sbjct 975 CATTTTTCAGATAATAATTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATT 1034 Query 38512 CCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTT------CTATT---ATTTTATTA 38562 || | ||||| | ||| | |||||| |||||||||| ||||| ||||||||| Sbjct 1035 CCGACGGATACTCGCATCAACATATGCTGTGGTCTTTCCGCAACTATTAAAATTTTATTA 1094 Query 38563 TT 38564 || Sbjct 1095 TT 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468463557952080