Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1427 185 1e-41 seq1105 134 2e-26 seq725 134 2e-26 seq224 104 3e-17 seq8822 95.1 2e-14 seq546 84.2 3e-11 >seq1427 Length=229792 Score = 185 bits (204), Expect = 1e-41 Identities = 678/1038 (65%), Gaps = 38/1038 (4%) Strand=Plus/Plus Query 158442 GTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTT 158501 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 158502 AAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTT 158561 ||||||| ||| || |||| |||||| | ||||| ||||| || | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 158562 CATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCAT 158621 |||||||| ||| ||| | | |||||| ||| | ||||| |||| ||| Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 158622 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCGT 158680 ||| | || ||||||| ||||| | ||||| ||| || || | | | || | | Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACT-TGAT 217546 Query 158681 ATTGGATTCTGAAATTGTTCTTGTAG--ACGAACATA-ATGTACCGCTCCCGTTTGGAAG 158737 | || ||||||||| | || ||| || || | | || ||| | || ||||| | Sbjct 217547 TCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 158738 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 158797 ||||||| | ||||| |||| | | ||| | | | | ||||| || |||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 158798 CTGTTTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTT 158857 ||| | || | ||||| ||| | | ||| ||| | | ||| || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 158858 TCTCAAAGATGTTATGGTCGAAATACCCAATAGAATAGTATTCTCAGAGTTGACGAATAT 158917 ||| |||| ||||| ||| | || || ||| || || ||| ||| | Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGA--AAT-T 217783 Query 158918 TAGTAACGAGTCTCAGTTAATTGATGTATTGGATGA-TGCACTAACGAGAAA---ATTAG 158973 || ||| | || | |||| | || ||||| || || | | | ||||| Sbjct 217784 TATTAA-AACTCGAAAAGAATTAAATGATATGATGACATCAATATTCAAACAAGGATTAG 217842 Query 158974 AAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGTT 159031 ||||| | || ||||||| || || ||||| || |||| ||||| || ||| | Sbjct 217843 AAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAAACGACATTGGCT 217900 Query 159032 AAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAGT 159091 ||| | || ||| ||| | | |||||| |||||| || ||| |||||||| || Sbjct 217901 GAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAGTTGT 217960 Query 159092 ACTAGGTGCTTACTATGGTAAAGGATCAAAGGGTGGTATTATGGCAGTCTTTTTAATGGG 159151 ||||||| || | ||||| || || ||||| || ||| || | ||||||||||| Sbjct 217961 TTTAGGTGCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAATTTTTTTAATGGG 218020 Query 159152 TTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTC----AGGACACG 159207 ||| | |||| | |||| || ||| || || |||||| || | |||||| Sbjct 218021 TTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGGACATA 218079 Query 159208 ATGATAATACGTTAAGGGTTTTGCAAGACCAATTAATGATGGTTAAAATTAACAAGGATC 159267 |||| ||| || ||| ||||| ||||| ||| ||||||| || Sbjct 218080 CTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAATGA-- 218137 Query 159268 CCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCCGATTTTG-TAGT 159325 || | | || || | ||||| ||||| ||||||| | ||||| ||||||| | || Sbjct 218138 -CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTGTTTGT 218195 Query 159326 AGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAACAGAGTT---TACATCTTC 159382 | | ||||| ||| ||| || ||||||| ||| ||||| |||| || || | || Sbjct 218196 A-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAAGCT-- 218252 Query 159383 CAAGTCACATACAGCAAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGA 159442 ||| | ||||||||| |||||||| || || |||||| | ||||| ||| | | Sbjct 218253 GAAG-CTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTCGTTA 218308 Query 159443 AGATAAAACGTGGAAAGA 159460 |||||||| |||||||| Sbjct 218309 TGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 134 bits (148), Expect = 2e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 64907 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 64966 |||||| |||||||||||||| |||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 64967 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 65026 | ||| ||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 65027 TTGTGGAATTTCCCAAATAGTTTTATA 65053 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 66009 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 66068 ||||||| |||||||| |||||||||||||||||| | ||| | | |||| || | Sbjct 85885 AATCCAGAACATTCATGAGGACACATCAACGACCACATATCATCAGCTTCAACTCTTTGC 85826 Query 66069 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTT 66128 ||||| | ||| ||||||||||| || ||||||||| | | | | ||| || ||| Sbjct 85825 ATAAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTT 85766 Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188 || ||||| ||||| | ||| || || | | |||||| |||||||||||||| ||| Sbjct 85765 CCGGTATTTTTTTTTAAATCAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATAT 85706 Query 66189 ATGGC 66193 || || Sbjct 85705 ATAGC 85701 Score = 105 bits (116), Expect = 9e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471 |||||| ||||||| || || |||| | | |||||||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 | || |||||||| ||||| || || | |||| | | ||||||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 65592 CTATGTCTCTTATTAGAGATTTCAGC 65617 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 || |||||||| || | |||||| ||||| || ||||| ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 65300 ACTATTTCTAAGACCGTA 65317 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 >seq725 Length=361488 Score = 134 bits (148), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || |||||||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 36301 | |||||| || | ||||| |||||||||||||| |||||||| ||||||||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 36302 ATAAGTCTCTCTCCATAACCGGCACT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 36358 | || | |||||| | || | | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 36359 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 36396 || |||| || || || | ||||||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 114 bits (126), Expect = 2e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||| ||||| || ||||| || ||||| || || |||||||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 36602 TATTTTTCGT-TTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 36660 | ||||| | | | || | | ||||| | | ||| || || | || ||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGT-TCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTC 98492 Query 36661 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 36720 ||| || ||||| ||||| || || || || || ||||| | |||||| ||| |||||| Sbjct 98493 TTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTC 98552 Query 36721 AATTGGAAAAATAACAAATCTATTTTGATTTT-TTGCAAGGATTGGTTC 36768 ||| |||||||| ||||| | || |||||| | |||| | |||||| Sbjct 98553 AATGGGAAAAATGACAAAGCGTCTTGGATTTTCTCGCAA-CAGTGGTTC 98600 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/151 (73%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 35811 TTTAAAAATCAACATCTAGAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 35867 |||||||||| |||| | | ||| || | |||| || | ||| ||||| | Sbjct 90599 TTTAAAAATCTGCATCAACTGTAAAGCACTGTTCTTCTTTTTTCGCCATCACTCCACACT 90658 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 |||| || || ||||| |||||||||||||| || || ||||| || || || | | Sbjct 90659 TTTGATACTCTCCCACTTTCTTTTCGAAAAAATTTGTCTTTCCTTCCAAAGAAATGTGCT 90718 Query 35928 CCATGAAATCGAATGGATTGATAACATTATA 35958 ||||||||||||||||||| ||||||||| Sbjct 90719 CCATGAAATCGAATGGATTTTCAACATTATA 90749 >seq224 Length=538787 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 65448 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 65507 |||| ||||||||| || ||||||||||| |||||||| ||||| || || | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 65508 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 65567 | | |||||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCT 65599 ||||| |||| ||| || || || | || ||| Sbjct 19566 CCTTGTACACTAATTCCTATTGGACGATATCT 19597 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 64905 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 64964 ||||| | |||||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 64965 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 65024 | || || || |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 65025 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq8822 Length=1639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575 || || ||||| || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 66576 ATGTGCTGAGGTCTTTC 66592 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 31231 ACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTATTATCA 31290 |||||||||| | ||||||||||||||| || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 31291 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATATCTATATAT 31347 |||||||||||| || ||||| | ||| ||| || | ||||||| || | || | Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAATTGAGATTT 78906 Query 31348 CTCAC 31352 || || Sbjct 78907 CTTAC 78911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658086768587880