Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1427 194 2e-44 seq1105 131 2e-25 seq725 122 1e-22 seq224 120 4e-22 seq8822 95.1 2e-14 seq546 84.2 3e-11 >seq1427 Length=229792 Score = 194 bits (214), Expect = 2e-44 Identities = 687/1043 (66%), Gaps = 48/1043 (5%) Strand=Plus/Plus Query 173690 GTTATGACTCCAATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTTT 173749 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 173750 AAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTT 173809 ||||||| ||| || |||| ||| || | ||||| ||||| ||| | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 173810 CATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCAT 173869 |||||||| ||| ||| | | |||||| ||| | ||||| |||| ||| Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 173870 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCAT 173928 ||| | || ||||||| ||||| | ||||| ||| || || | | | || | || Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACT-TGAT 217546 Query 173929 ATTGGATTCTGAAATTGTTCTTGTAG--ACGAACATA-ATGTACCGCTACCGTTTGGAAG 173985 | || ||||||||| | || ||| || || | | || ||| | || ||||| | Sbjct 217547 TCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 173986 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 174045 ||||||| | ||||| |||| | | ||| | | | | ||||| || |||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 174046 CTGTTTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTT 174105 ||| | || | ||||| ||| | | ||| ||| | | ||| || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 174106 TCTCAAAGATGTTATGGTTGAAATACCCAATAGAATAGTATTCTCAGAGTTGACGAATAT 174165 ||| |||| ||||| ||| | || || ||| || || ||| ||| | Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGA--AAT-T 217783 Query 174166 TAGTAA----CGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTA-ACAAGAAA--A 174217 || ||| ||| | |||| ||| ||| ||||| || || ||| || | Sbjct 217784 TATTAAAACTCGA-AAAGAATTAAATGA--TAT--GATGACATCAATATTCAAACAAGGA 217838 Query 174218 TTAGAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGAT 174275 ||||||||| | || ||||||| || || ||||| || |||| ||||| || | Sbjct 217839 TTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAAACGACATT 217896 Query 174276 GGTTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCTATGGCAGATTCTGCAGATTTAG 174335 || | ||| | || ||| ||| | | |||||| ||||| || ||||||||||| Sbjct 217897 GGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAG 217956 Query 174336 TAGTACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATCATGGCAGTCTTTCTA 174394 | || ||||||| || | ||||| || || ||| ||||| || ||| || | ||| || Sbjct 217957 TTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAA-GGTGGAATGATGTCAATTTTTTTA 218015 Query 174395 ATGGGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTC----CGG 174450 |||||||| | ||| | |||| || ||| || || |||||| || | || Sbjct 218016 ATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGG 218074 Query 174451 ACACGATGATAATACGTTAAGAGTTTTGCAAGACCAATTAAAGATGATTAAAATTAACAA 174510 ||| |||| ||| | || ||| ||||| | ||| | ||| ||||||| Sbjct 218075 ACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAA 218134 Query 174511 GGATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCCGATTTTG 174569 || || | | || || | ||||| ||||| ||||||| | ||||| ||||||| Sbjct 218135 TGA---CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTG 218190 Query 174570 -TAGTAGAGGATCCAAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTT---TACA 174625 | ||| | ||||||||| ||| ||| ||||||| ||| |||||||||| || || | Sbjct 218191 TTTGTA-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAA 218249 Query 174626 TCTTCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATT 174685 || ||| | |||||||| |||||||| || || |||||| | ||||| ||| Sbjct 218250 GCT--GAAG-CTCATACAGC---AGGAATATCAATAAGGTTTCCTCGTGTTACTTTAATT 218303 Query 174686 AGAGAAGATAAAACGTGGAAAGA 174708 | | |||||||| |||||||| Sbjct 218304 CGTTATGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 131 bits (144), Expect = 2e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 78786 CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 78845 |||||| || ||||||||||| |||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 78846 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 78905 | ||| ||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 78906 TTGTGGAATTTCCCAAATAGTTTTATA 78932 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 79850 TATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909 ||||||| ||| || || | |||||| || |||||||| |||||| | ||||| Sbjct 85923 TATATAACTCTTCAAATTCTTTACCCCAACTGTCAAATAATCCAGAACATTCATGAGGAC 85864 Query 79910 ACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 79969 |||||||||||||| ||||| | | |||| || |||||| | ||| |||||||||| Sbjct 85863 ACATCAACGACCACATATCATCAGCTTCAACTCTTTGCATAAATAAATCGGGAATCCAAA 85804 Query 79970 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029 | || ||||| ||| | | | | || || ||||| ||||| ||||| | ||| | Sbjct 85803 GTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCCGGTATTTTTTTTTAAATCAA 85744 Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 | || | | |||||| | |||||||||||||| ||||| || Sbjct 85743 GAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATATAGC 85701 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 |||||| |||||| |||||| |||| | || |||| ||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410 | | |||||||| ||||| || || | |||| | | ||||||| || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 79411 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 79470 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 79471 CTATGTCTCTTATTAGAAATTTCAGC 79496 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 |||||||||||| || | |||||| ||||| || || || ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 79179 ACTATTTCTAAGACCGTA 79196 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 79659 ATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 ||||| | ||||||||| || | || || || ||||| || || | ||||||||||| Sbjct 90802 ATATTCAACTATTTCAGTACATAAATTGCTGCATTTAATTGTACCGAGGTTTTGTTGATT 90743 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 | || ||||| ||||| ||||| | ||| | ||||| ||||||||||||||||| Sbjct 90742 AGATTTACGATTACATGCATCTTTATACACCATGTAAGGAGTTCCAGTTTCAATCTGAGA 90683 Query 79779 TTCTATAATCGC 79790 | || ||| || Sbjct 90682 CTGTAAAATGGC 90671 >seq725 Length=361488 Score = 122 bits (134), Expect = 1e-22 Identities = 158/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || |||| ||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 | |||||| || | ||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 50104 ACAAGTCTCTCTCCATAACTGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 50160 |||| | |||||| | ||| | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 50161 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 || |||| || || || | || ||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 49645 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 49704 |||| || | ||| ||||| ||||| || || ||||| |||||||||||||| Sbjct 90634 TCTTTTTTCGCCATCACTCCACACTTTTGATACTCTCCCACTTTCTTTTCGAAAAAATTT 90693 Query 49705 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATA 49760 || ||||||||||| || || | ||||||||||| || ||||| ||||||||| Sbjct 90694 GTCTTTCCTTCCAAAGAAATGTGCTCCATGAAATCGAATGGATTTTCAACATTATA 90749 >seq224 Length=538787 Score = 120 bits (132), Expect = 4e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 79298 TGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGT 79357 |||| |||||||||| ||| | | |||||||||||||| || |||||||| || | Sbjct 19417 TGTAAGTTTCATAAGATCCAAATTGGTGTGCTAATTCACAACTTGCTTCTAATGCACCAT 19476 Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGAT 79417 ||||||| ||||| ||||| | ||| | | ||||||||| |||||||| |||| Sbjct 19477 AATAAATAGTTTCAAAAATTTGTACATTCAACTTCTGTGCTTCTTCACTATCAAAAGGAT 19536 Query 79418 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 79477 | | | |||||||| || || ||||||||||| |||| ||| || || || | || || Sbjct 19537 ATCTCATTAGAATAAATGCATCAGCTAATCCTTGTACACTAATTCCTATTGGACGATATC 19596 Query 79478 T 79478 | Sbjct 19597 T 19597 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 78784 CTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 78843 ||||| | || ||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 78844 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 78903 | || || || |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 78904 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq8822 Length=1639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || ||||| || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 80455 ATGTGCTGAGGTCTTTC 80471 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 45006 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCG 45065 ||||||||||| | |||||||||||| || || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 45066 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATATCTATGTAT 45122 |||||||||||| || ||||| | ||| ||| || | ||||||| || | | | Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAATTGAGATTT 78906 Query 45123 CTTAC 45127 ||||| Sbjct 78907 CTTAC 78911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718174913289480