Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1427 165 8e-36 seq725 118 1e-21 >seq1427 Length=229792 Score = 165 bits (182), Expect = 8e-36 Identities = 673/1043 (65%), Gaps = 45/1043 (4%) Strand=Plus/Plus Query 120501 TGGTACTTTTTACTCCTGTAAAACCTATGCTAGCA-AACGTGTGTAAATCTAGTTATTAT 120559 ||| | |||| |||||||| ||| |||||||| ||| | ||| ||| | || Sbjct 217303 TGGCAGTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCT-TGTCGTTCTGTAGAAAAT 217361 Query 120560 GCATTTAAAAAGTATAAAGATGGAATCTGTGCAGAAATAAAGTACGATGGTGAACGAATT 120619 || |||||||| | | | || || | ||| || || || || ||||| ||||| || Sbjct 217362 GCCTTTAAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTT 217421 Query 120620 CAAATTCATAAAGACAATAATTTATATAAATATTTTAGTAGAAATCTAAAACCAGTTTTA 120679 ||| |||||||| | |||| | || |||||||||| ||| | ||||||| || | Sbjct 217422 CAAGTTCATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAA 217481 Query 120680 TTTCATAAAATAGAGGGATTTGATGAGTTTCTAACCAGCGCTTTCCCTTCAGCTAATAAC 120739 ||||||||| || | || || | | ||||| | || || || Sbjct 217482 CAGCATAAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGAC 217541 Query 120740 TTTATTTTAGATGCTGAATTAATATTAATTGATTTGAATACTAACAGATTTGTACCTTTT 120799 || ||| | || ||||| | | || | ||| || || | | | | || ||| Sbjct 217542 TTGATTCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTT 217601 Query 120800 GGTTCATTAGGTATAAATANNNNNNNNNNNTTTAAAAACTCTAGCACTTGTTTATTTGTC 120859 ||| | |||||| | | | ||||| | | | |||||||||||| Sbjct 217602 GGTACTTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTG 217661 Query 120860 TTTGATTGTCTATTTTACAAT--AATGTAAGTT-TAATGAGTCTGCCATTTGTTAATAGG 120916 ||||||||| ||| ||||||| || ||| | ||||| | || || | || Sbjct 217662 TTTGATTGTATATATTACAATGGAA---AAGATCTAATGGATTGTCCTCTTAAAGAAAGA 217718 Query 120917 AGAAAAATTATTGTTGATAATATCAATGAAATAAAAAATAAGGTTATGGTCTCAGAA--G 120974 |||||||| | || ||||| | ||| | ||| || | ||| | || ||| | Sbjct 217719 CGAAAAATTCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATG 217778 Query 120975 CATTTTATGTGTATAAA--GAAAATGATTTAAATAAAATAATGGATGACGT---TATTaa 121029 | ||||| || || ||||| || |||||| | || |||||| | |||| | Sbjct 217779 AAATTTAT---TAAAACTCGAAAA-GAATTAAATGATAT----GATGACATCAATATTCA 217830 Query 121030 aaaaaa-aCTAGAAGGGTTGATATTAAAAGGAATAAAT--ATTAATTATGTACCTGGAAA 121086 || || | ||||||| | | ||||||| || || | || |||| ||||||||| Sbjct 217831 AACAAGGATTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAA 217888 Query 121087 AAGAGGTTGGTTAAAGATGAAGAAGGATTACTTAGATGATGGATCCATGGCAGATTCTGC 121146 | || |||| | || | || || ||||| | |||| || |||||| || ||| Sbjct 217889 ACGACATTGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGC 217948 Query 121147 AGACTTAGTAGTTTTAGGATCATATTACGGTAAAGGGTCTAAGGGTGGTACACCATCAAT 121206 ||| ||||| |||||||| |||||| |||| || ||| ||||| | ||||| Sbjct 217949 AGATTTAGTTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAAT 218008 Query 121207 ATTTTTAATGGGGTGTTATGATAATGAAAGTAATAATTGGAAAACTGTAACTAAA-TGC- 121264 ||||||||||| || | ||||| | | || ||| || || |||||| | | Sbjct 218009 TTTTTTAATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAAGTACA 218068 Query 121265 -TCCGGACACAACGATGACACATtaaaaaaagtacaaaaagaaataaagtttttaaaaat 121323 ||||| | |||| ||| ||||| |||||| |||| || | | | ||| | Sbjct 218069 TGGAGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGT 218128 Query 121324 tagtaaagatacaaaaaaaatcccaaaaTGGTTAATAGTAAATAAAATATATTA-TCCAG 121382 || || || || | | ||||| | ||||||| || || ||||| | | | ||||| Sbjct 218129 TAACAATGACAC---AGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAG 218184 Query 121383 ATTTTGTAGTTTGT---GATCCaaaaaaaTCACAGGTATGGGAAATATCCGGATCTAGTT 121439 ||||| |||||| |||||||||| ||||||||||||||| || | ||| | | Sbjct 218185 ATTTT---GTTTGTAAAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAAT 218241 Query 121440 TTACAAAATCTATACATCACACAGCAGATGGTATTTCAATAAGATTTCCTAGATTTaaaa 121499 || | ||| || | ||| |||||| || || |||||||| |||||| | ||| Sbjct 218242 TTTCTAAAGCTGAAGCTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTT 218298 Query 121500 aaaTTAGATATGATAAAAATTGG 121522 |||| | |||||||||| |||| Sbjct 218299 TAATTCGTTATGATAAAACTTGG 218321 >seq725 Length=361488 Score = 118 bits (130), Expect = 1e-21 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 |||||||| || || | ||| || ||||||||||| ||||| | || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14015 |||||||| ||||| ||||| || || |||||||| ||||| || ||||| ||||| || Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 14016 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTC-GATATCCATTTTCTAGCCCATTCAGA 14074 | | ||||||||||| | || | | || |||||| ||| | ||||| |||| Sbjct 94866 ACAACACGTTCTCCAAATG-TGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGC 94924 Query 14075 tttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 |||| |||| | | | ||| || || ||||||||||| Sbjct 94925 TTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAATAA 94966 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 ||||||||||||| ||||| ||||||||||| ||||| || || |||| | ||||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 | | | || |||| || | || ||||| || | |||||| ||||| || |||| Sbjct 98432 AATGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTT 98491 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | ||||| ||||| || ||| ||||||| || ||||| ||| || || |||| Sbjct 98492 CTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATT 98551 Query 14437 ATATAGGAAAAACTACAAA 14455 || ||||||| ||||| Sbjct 98552 CAATGGGAAAAATGACAAA 98570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479665293553800