Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq852 114 1e-20 seq2640 95.1 9e-15 seq1332 82.4 6e-11 seq381 82.4 6e-11 >seq852 Length=358492 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||| |||||||| || || || | || || ||||| || ||||||||| Sbjct 357452 TCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAA 357511 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || |||| ||||||||||| ||| | ||||||||| || ||| | ||||| | Sbjct 357512 ATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTT 357571 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 | | || || | | || || || | ||| || |||||||| || |||||||||||| Sbjct 357572 TCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACA 357631 Query 43099 AAAATTTGCAT 43109 || |||||||| Sbjct 357632 AATATTTGCAT 357642 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||||| ||| | ||||||||||| || ||||| || | |||||||| ||| Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || |||| || || ||||| |||||||||||||| ||||| || || | ||| Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| | || || | | | || |||| | || || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || |||||||| |||| || ||||| ||||| |||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Score = 105 bits (116), Expect = 5e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990 || ||||| ||||| || || |||| || | ||| || ||||| |||||||| | |||| Sbjct 357920 TTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGT 357979 Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCG 43050 || |||| ||| | |||||||| || ||| |||| || | | | ||||||| Sbjct 357980 TGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCG 358039 Query 43051 CCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 | | ||| || || | || ||||| || || ||||||||||| || ||||| |||||| Sbjct 358040 CTTGGCTCTACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATT 358099 Query 43111 TTC 43113 ||| Sbjct 358100 TTC 358102 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||| ||| | |||| |||||||| | ||| ||||| || Sbjct 357188 CCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAA 357247 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || |||| |||||||| || || |||||||| | | ||| ||||| | || Sbjct 357248 AGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGA 357307 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||| || | | | || |||| || || || Sbjct 357308 ATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACC 357367 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| ||||||||||| || || || ||||| ||||| |||||||| Sbjct 357368 TCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq2640 Length=94256 Score = 95.1 bits (104), Expect = 9e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||||||||| | || | ||| | |||||||| || || | ||| ||||||||| Sbjct 13607 CCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGAC 13666 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGG 42997 | || || |||| |||||||| || || ||||| ||||||| ||| ||||||| Sbjct 13667 AGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGG 13721 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || || | ||||| ||| | || ||| ||||| | ||||||||||| Sbjct 13379 CCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAA 13438 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || ||||||||||| ||||| || |||| || || ||||||| || Sbjct 13439 AGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGG 13498 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| | ||||| | | | |||||| | | ||||| Sbjct 13499 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACT 13558 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || || || ||||| || || || || ||||| |||||| Sbjct 13559 TCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 >seq1332 Length=188647 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || |||| | ||| |||||||| || || || | || || ||||| || ||||||||| Sbjct 169189 TCTTTTTTAATATTATAATCGGATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAA 169248 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016 || |||| ||||||||||| ||| | ||||||||| || Sbjct 169249 ATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTC 169286 >seq381 Length=560238 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 |||||| || | ||| | |||| |||||||| | || ||||| |||||||||||| | Sbjct 529209 TCTTAAAACAAGATGTAAAGTGGATTCCTTTTGAATGTTATAATCAGACAATGTACGTCC 529268 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCT 43008 || || |||||||| || |||||||| || || || ||||| | || | |||| Sbjct 529269 ATCTTCTAATTGTTTTCCAGCAAAAATTAAACGTTGCTGATCAGGAGGGATACCT 529323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381320996470506