Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq725 134 2e-26 seq1105 125 1e-23 seq8822 104 3e-17 seq224 100 4e-16 seq546 84.2 3e-11 >seq725 Length=361488 Score = 134 bits (148), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || |||||||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCA 42208 | |||||| || | ||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 42209 ATAAGTCTCTCTCCATAACCGGCACT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 42265 | || | |||||| | || | | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 42266 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303 || |||| || || || | || ||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 41750 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 |||| || | ||| ||||| ||||| || || ||||| |||||||||||||| Sbjct 90634 TCTTTTTTCGCCATCACTCCACACTTTTGATACTCTCCCACTTTCTTTTCGAAAAAATTT 90693 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATA 41865 |||||||||||||| || || | ||||||||||| || ||||| ||||||||| Sbjct 90694 GTCTTTCCTTCCAAAGAAATGTGCTCCATGAAATCGAATGGATTTTCAACATTATA 90749 >seq1105 Length=277015 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 70869 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATT 70928 |||||| |||||||||||||| |||| || ||| | || || || || ||||| || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 70929 CATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 70988 | |||||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 70989 TTGTGGAATTTCCCAAATAGTTTTATA 71015 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 120 bits (132), Expect = 4e-22 Identities = 163/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 71933 TATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCG 71989 ||||||| ||| || || | |||||| |||| |||||||| |||||||| | Sbjct 85923 TATATAACTCTTCAAATTCTTTACCCCAAC---TGTCAAATAATCCAGAACATTCATGAG 85867 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 |||||||||| |||||| ||||| | | |||| || |||||| | ||| ||||||| Sbjct 85866 GACACATCAACGACCACATATCATCAGCTTCAACTCTTTGCATAAATAAATCGGGAATCC 85807 Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109 |||| || ||||| ||| | | | | || || ||||| ||||| ||||| | || Sbjct 85806 AAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCCGGTATTTTTTTTTAAAT 85747 Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 | || || | | |||||| | |||||||||||||| ||||| || Sbjct 85746 CAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATATAGC 85701 Score = 105 bits (116), Expect = 9e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433 |||||| ||||||| || || |||| || || |||||||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 | | ||||||||| ||||| || || | |||| | | ||||||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 71494 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGT 71553 || ||||| | | |||||| | || ||||| |||||||| ||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 71554 CTGTGTCTCTTATTAGAAATTTCAGC 71579 | || |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 || |||||||| || | |||||| ||||| || ||||| ||||| |||| || | | Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 71262 ACTATTTCTAAGACCAT 71278 ||||||||| | ||||| Sbjct 100816 ACTATTTCTTACACCAT 100800 >seq8822 Length=1639 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 72478 TACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAAC 72537 || || ||||| || | || || || || ||||||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 72538 ATATGCTGAGGTCTTTC 72554 |||||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq224 Length=538787 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 71410 GCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTG 71469 |||| ||||||||| || |||||||| ||||||||||| ||||| ||||| | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 71470 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 71529 | | |||||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 71530 CCTTGAACGCCAATACCGATAGG 71552 ||||| || | ||| || || || Sbjct 19566 CCTTGTACACTAATTCCTATTGG 19588 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 70867 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATA 70926 ||||| | |||||||||||||| || | || ||| ||||||| | | ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 70927 TTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 70986 | |||||||| |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 70987 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 86/112 (77%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 36489 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 36548 ||||||||||| | |||||||||||| || || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 36549 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 36597 |||||||||||| || ||||| | ||| ||| || | ||||||| || Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAAT 78898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671051473717320