Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1218 170 1e-37 seq852 134 1e-26 seq2640 125 5e-24 seq1332 89.7 4e-13 >seq1218 Length=332501 Score = 170 bits (188), Expect = 1e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||| | ||| | ||||| ||||| ||||| || ||||||||||| | Sbjct 114275 CCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGAT 114216 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||||| | |||||| || || | || ||||||||||||||| ||| Sbjct 114215 AGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGA 114156 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| |||||| ||| ||| |||| || ||||| || ||| || Sbjct 114155 ATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACT 114096 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| ||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 114095 TCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| ||| | ||||||||| ||||| || ||||| || || ||||| ||| Sbjct 114503 CCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAA 114444 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | ||||||| || || || || || | |||| | ||||||||| ||| Sbjct 114443 AGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGA 114384 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| |||||| ||| |||||| ||||||| || ||||| ||||| Sbjct 114383 ATGCCTTCTTTGTCCTGAATTTTAGCT-TTTACATTTTCTATTGTGTCGCTGGGCTCTAC 114325 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || || || || || || || ||||| ||||| ||||||||| Sbjct 114324 TTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCATA 114276 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | ||| || | ||| |||||||| || || ||||| || ||||| ||||| Sbjct 114047 CCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGAC 113988 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | ||||| | || |||||||| | |||| ||| ||||| || ||| Sbjct 113987 AGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGG 113928 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || ||| ||| |||||| | ||||| ||||| || || || Sbjct 113927 ATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACT 113868 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||||||||| || || |||| ||||| ||||| || ||||| Sbjct 113867 TCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 >seq852 Length=358492 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | ||| ||||||||||| || ||||| || ||||| ||||| Sbjct 357872 CCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGAC 357931 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||||| | ||| || || ||| | ||||| | ||||||||| ||| Sbjct 357932 AAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGA 357991 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| ||| |||||| |||||| | || || || ||||| ||||| Sbjct 357992 ATGCCTTCTTTGTCTTGAATCTTTGCT-TTTACATTCTCGATTGTGTCGCTTGGCTCTAC 358050 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || ||||| || || || || |||||||| || ||||| ||||| || Sbjct 358051 CTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTT 358101 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| ||| | | || || ||||| || || |||||||| || || |||||| | Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||||||||| || || || | || || | ||||| ||| || Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| ||| ||||| ||| || ||||||||||||| || ||| || Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGC-CTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||||||||| || || |||||||| ||||| |||||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||| | || ||||| || || || || || || ||||||||||| Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | |||| ||||| ||||| || || | ||||| || || ||||| || Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| || || |||||| |||||| |||| || |||||||| |||||| Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||||||||| || || | || || || ||||| ||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 Score = 113 bits (124), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 15167 GTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15226 ||||| || ||||| || || ||||| || | | |||| || ||||| || || Sbjct 357218 GTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCCAATTGCTTTCCT 357277 Query 15227 GCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTT 15285 || | || | | || || || |||||| |||||||| || ||||| ||| || Sbjct 357278 GCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTAGCT-TT 357336 Query 15286 TACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGT 15345 |||| ||||||||||||||||| ||| || ||||| || || |||||||| ||||| || Sbjct 357337 TACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTTTTACCAGTCAGGGT 357396 Query 15346 TTTTACAAAAATTTGCATA 15364 ||| ||||| ||||||||| Sbjct 357397 TTTAACAAATATTTGCATA 357415 >seq2640 Length=94256 Score = 125 bits (138), Expect = 5e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || |||||||| ||||||||||| || | | ||||||||| || Sbjct 12718 ATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTCTAGCTG 12777 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | |||| ||||||||| ||| ||| || ||||||||||| ||| || Sbjct 12778 TTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTGAATCTT 12837 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||||||| |||| || || || || || || ||||| || ||||| || || || Sbjct 12838 AGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTTTCCGGT 12897 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| Sbjct 12898 AAGTGTTTTCACGAAGATCTGCAT 12921 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||| | |||| ||| || ||||| ||||| || ||||| || || Sbjct 12923 CCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGAC 12982 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | |||||||||||||| ||||| | || | | ||||| || ||| Sbjct 12983 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGA 13042 Query 15257 ATTCCTTCTTTGTC-ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| | ||||||| |||||| | || |||||||| || || || Sbjct 13043 ATTCCTTCTTTGTCTTGGATTTTTGCT-TTTACATTCTCGATGGTATCACTCGGCTCCAC 13101 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||| ||||| || || ||||| || ||||| ||||| |||||| Sbjct 13102 TTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCATA 13150 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || |||||||| |||||||||||| || | | | ||||| ||||| Sbjct 13402 ATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTCCAATTG 13461 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | |||| |||||| || ||| || |||||||| ||||| ||||| Sbjct 13462 TTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATTTT 13521 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| ||| |||| || || || || ||| || || | ||| ||||| ||||| || Sbjct 13522 TGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTTACCGGT 13581 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || || ||||| ||||| Sbjct 13582 GAGGGTCTTGACGAAAATCTGCAT 13605 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||| || || || ||||||||||| ||||| || || ||||| || Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | ||||||||| || || || || |||||| | ||||| || ||| Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| |||||| ||||||| || || || ||||| Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| || ||||| || || || || ||||||||||| || |||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCATA 12694 >seq1332 Length=188647 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 15207 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTT 15266 |||| |||| ||||| || || | ||||| || || ||||| | || |||||||| | Sbjct 168995 CGTCCGCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCATACGGGATTCCTTCCT 169054 Query 15267 TGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAA 15326 | || |||||| ||||| |||| || |||||||| |||||| || || |||| Sbjct 169055 TATCCTGGATTTTGGCTTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAA 169114 Query 15327 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||| || || | || || || ||||| ||||| Sbjct 169115 TGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 169151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362133042185037