Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq852 111 1e-19 seq1218 102 5e-17 seq2640 93.3 3e-14 >seq852 Length=358492 Score = 111 bits (122), Expect = 1e-19 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 ||||| || || ||||| || || | |||||||| | || || ||||| || || || Sbjct 357862 AATCTGCATTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTT 357921 Query 33193 GTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTG 33252 |||||||||||| || | ||| || | ||||||||| || || || | || || Sbjct 357922 ATAATCAGACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTG 357981 Query 33253 GTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTT 33312 ||| | || ||||||||||| || |||| |||||| | | || |||||| | Sbjct 357982 GTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCT 358041 Query 33313 GGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || | || |||| ||| || || || || || |||||||| |||||||| ||||| || Sbjct 358042 TGGCTCTACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTT 358101 Score = 107 bits (118), Expect = 1e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| || || | ||||| || | || || |||||||| ||||| ||||| || Sbjct 357415 ACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGA 357474 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || || ||||||||||| ||| ||||| | || || || | || Sbjct 357475 TAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGG 357534 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||| |||||||| || |||| ||| || || ||| || || || |||||| Sbjct 357535 TATACCTTCTTTGTCTTGAATCTTTGCC---TTGACGTTTTCTATGGTATCACTGGGTTC 357591 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| |||| || || |||||||| ||||||||||| || || |||||||| Sbjct 357592 AACTTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||| |||||| || || || ||||| ||||| |||||||| | || | ||| ||| Sbjct 357206 ACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCC 357265 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 ||||||||||| ||| || | | ||||| || | || || |||||||| || | Sbjct 357266 AATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGG 357325 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | || |||||| ||| || || ||| | |||| || || | |||||| ||| Sbjct 357326 ATTTTAGC---TTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTT 357382 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || ||||| || || |||||||| Sbjct 357383 TTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq1218 Length=332501 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 || ||||||| ||||||||||| || |||||||| || || | | | | ||| ||| Sbjct 114485 ACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCC 114426 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || ||||| || ||| || | | || ||||| | || ||||||||||| || | Sbjct 114425 AACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTGA 114366 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || |||||| ||| || |||||| |||| | || ||||| ||||| || ||| Sbjct 114365 ATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCTTT 114306 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || ||||| || || |||||||| Sbjct 114305 CCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 100 bits (110), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || || ||||| || || |||||||| || | || | ||| |||| ||| ||||| Sbjct 114245 GTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCC 114186 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAA---TCGCCTGT 33289 ||| ||||||||||| ||||| | || ||||||||||| || || | ||| Sbjct 114185 GCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTTTAGCC--- 114129 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || ||| ||| || || |||||| ||| || | ||| || ||||| || || ||| Sbjct 114128 TTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGA 114069 Query 33350 GTTTTTACGAAAATTTGCAT 33369 ||||| || || |||||||| Sbjct 114068 GTTTTGACAAATATTTGCAT 114049 >seq2640 Length=94256 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| ||| | |||||||||||||| || |||||||| |||| || | ||| || Sbjct 12712 CACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTC 12771 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 | || || || || || | |||||| || || | ||||| |||||||| || Sbjct 12772 TAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTG 12831 Query 33280 AATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 |||| ||| ||||| ||| || ||||| |||| | || || | ||| || || Sbjct 12832 AATCTTAGCC---TTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGT 12888 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| ||||| ||||| ||||| || ||||| Sbjct 12889 CTTTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 91.5 bits (100), Expect = 9e-14 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| || | ||||||||| || | || |||||||| || |||||||| || ||| Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || || || ||| || | ||||| || |||||| | | || || || | || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 33263 ATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||||||||| || | | ||| ||||| ||| || ||||| | || | Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCC---TTTACGTTTTCTATAGTGTCACTCGGCTCT 12643 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || || || ||||| || |||||||| || || ||||| Sbjct 12644 ACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318736973488386