Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq852 118 8e-22 seq2640 93.3 3e-14 seq1218 91.5 1e-13 seq381 89.7 4e-13 >seq852 Length=358492 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||| ||| | | ||||| || ||||| ||||||||||||||||||||| Sbjct 357415 ACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGA 357474 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| || |||| || ||||| ||||| ||||| || || | || || || | || Sbjct 357475 TAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGG 357534 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 || ||||||||| ||| ||| ||| ||||| | | | ||||| || || || Sbjct 357535 TATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | |||||| ||||| || || | ||| ||||||||||||||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||| ||| | ||| || ||||| ||||||||||| | || | || ||| Sbjct 357206 ACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCC 357265 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||| ||||||||||| || | || ||||| || | || | ||||||||||||| Sbjct 357266 AATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGG 357325 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||| || | | | ||||| || ||||| || | || || |||||| Sbjct 357326 ATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTTTTA 357385 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || |||||||||||||| Sbjct 357386 CCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq2640 Length=94256 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||| | || ||| | || | ||| || ||||||||||| || |||||||||||| Sbjct 13607 CCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGAC 13666 Query 43955 A-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | | || ||| | || |||||||| ||||| ||||| ||||| | ||||| || | || Sbjct 13667 AGAGTG-CGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGG 13725 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || ||| |||||| || || | | | ||||| || ||||| Sbjct 13726 AATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCAC 13785 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || ||||| || || || ||||| ||||| ||||| Sbjct 13786 TTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCAT 13833 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGA-CGCTCATCGTC 43971 ||||| |||| ||| |||||||||||||| ||||| | || | || | || || Sbjct 12257 ACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATC-TGAAAGCGTGCGGCCGTCTTC 12315 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | |||||||| ||||| || | | |||||||| |||| | |||||| || ||| Sbjct 12316 TAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 12375 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || || ||||| | | | || || |||||| || || | || |||||||| Sbjct 12376 TATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACTTCCAGTGTTATTGTTTT 12435 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || ||||| ||||||||||| Sbjct 12436 ACCAGTCAATGTTTTCACGAATATTTGCAT 12465 >seq1218 Length=332501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || | |||||| | || | || |||||| ||||| || || || ||||| Sbjct 114276 ACCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGA 114217 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || ||| | || |||| ||||||||| ||||| || || ||||| ||||| |||| Sbjct 114216 TAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGG 114157 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| || |||||| || || | ||| ||||| || || || Sbjct 114156 AATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAAC 114097 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| ||||| || || | ||| || |||||||||||||| Sbjct 114096 TTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 >seq381 Length=560238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| |||||||| || | ||||| ||| || |||||||| |||||||| Sbjct 529197 ACCACCTCTTAATCTTAAAACAAGATGTAAAGTGGATTCCTTTTGAATGTTATAATCAGA 529256 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| ||| |||| || ||||||||||| ||||| || || |||||||| || |||| Sbjct 529257 CAATGTACGTCCATCTTCTAATTGTTTTCCAGCAAAAATTAAACGTTGCTGATCAGGAGG 529316 Query 44014 TACACCT 44020 | |||| Sbjct 529317 GATACCT 529323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354732385479636