Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2640 111 1e-19 seq852 104 2e-17 seq1218 96.9 3e-15 >seq2640 Length=94256 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || || |||| || | ||| ||||| |||||||| || ||||| || || Sbjct 12921 TTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCG 12980 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| | |||||| |||||||| || ||| ||||||| ||||||||||| | Sbjct 12981 ACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAG 13040 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| |||||| ||| || | | | | ||| | || ||| Sbjct 13041 GAATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCA 13100 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||| ||||| || || |||| || || || ||||| ||||| Sbjct 13101 CTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || | ||| | ||||| ||| || || || |||||||| |||||||||||| Sbjct 13377 TTCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGG 13436 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | || | ||||||||||||||| || || | || || | || |||||| | Sbjct 13437 AAAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAG 13496 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| ||||| |||||| || || | | | | || | ||||| Sbjct 13497 GGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGA 13556 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||| ||||| || ||||| | || ||||| ||||| |||||| Sbjct 13557 CTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 >seq852 Length=358492 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || ||||| || | | ||||| || || |||||||||||||| || || |||||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| ||||| || || ||| |||| | |||||||||||| || Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||| ||| || || | | | | ||| | ||||| | Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||||||||| || || | ||||| ||||| |||||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| || | | |||||||| || ||||||||||| || ||||| ||||| Sbjct 357870 TTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAG 357929 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| | ||||| | ||| || || || |||| | ||||||||| ||| | Sbjct 357930 ACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCG 357989 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||||||| ||| ||| ||| || | | | | |||| || || Sbjct 357990 GAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTA 358049 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACT 20217 |||| ||||| || || || || | ||||| || ||||| |||||||| || || Sbjct 358050 CCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTTCAATCT 358107 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || || || | ||||||||| || |||||||| || || ||||||||||| | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACGGG 20100 | ||| | || || || ||||| || ||| |||| | | ||| || || | |||| Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | ||||| || || ||||| || || | | | || ||||| ||||| Sbjct 357764 -ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTAC 357822 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| ||||||||||| || || || || || || ||||| |||||| Sbjct 357823 CTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 >seq1218 Length=332501 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA--TCTTCCAATT 20063 || || || |||||||| || ||||||||||| | |||| | | ||||||| || Sbjct 114251 TGAAGCGTGGATTCTTTCTGGATGTTGTAATC--CGATAGGGTGCGCCCGTCTTCCAGTT 114194 Query 20064 GTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTT 20123 |||| |||||| | || | | ||||| ||| || | |||||||||||| ||||| Sbjct 114193 GTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTT 114134 Query 20124 TTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGG 20183 | || || | ||| | ||| | ||||| ||| | ||||| |||||||| | Sbjct 114133 TAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAG 114074 Query 20184 TCAACGTTTTGACAAAAATTTGCATT 20209 ||| ||||||||||| ||||||||| Sbjct 114073 TCAGAGTTTTGACAAATATTTGCATT 114048 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 |||||||||| | || | || ||||| || || || ||||| || || ||||| ||| Sbjct 114506 TTTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCG 114447 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||||| || || || ||| | || || |||||||| ||| Sbjct 114446 GAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGC 114387 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||||||| |||||| ||| || | | | | |||| || || Sbjct 114386 GGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCT 114327 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 114326 ACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419533725840417