Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1745 132 6e-26 seq665 105 8e-18 >seq1745 Length=180974 Score = 132 bits (146), Expect = 6e-26 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||| ||||| || || ||| | ||||| ||||| |||||||||||||||| Sbjct 29583 TTCATGATACAGTTGTTAACCAATTACTTGCAAAAATTGATGGCGTAGAATCCTTAAATA 29524 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||||| || | || ||||| || || ||| | |||||||| || || || |||| Sbjct 29523 ATATTTTGGTTATTGGGATGACAAATCGTAGGGATATGATTGATGAAGCATTGTTGCGAC 29464 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGG 164933 ||||||| |||||| | |||| |||||||| Sbjct 29463 CTGGTCGTTTAGAAGTACAAATGGAAATAGG 29433 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/203 (72%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 |||| | |||||| | | |||||| || | ||||||||||||| || ||||| | Sbjct 33682 TAGGTTTAAAACATGTTAGAGGAATATTGCTTTTTGGACCTCCTGGTACTGGAAAAACTT 33623 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATG 164617 |||||||||| |||| ||| | |||||| || || || ||| || || |||| Sbjct 33622 TAATGGCTCGCCAAATTGGACAAA-TGTTAAATGCACGTGAACC--TAAGATAGTAAATG 33566 Query 164618 GTCCTGA-ATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 ||||| | ||| | || ||||||||||| || |||||||| ||| | |||| | | ||| Sbjct 33565 GTCCTCAGATTCTAGAT-AAATATGTAGGAGAATCAGAAGCAAATATAAGAAGGCTATTT 33507 Query 164677 CAGGAGGCTGAAGAAGAACAAAA 164699 || || ||||||||| |||| Sbjct 33506 GCTGAAGCAGAAGAAGAAGAAAA 33484 >seq665 Length=373109 Score = 105 bits (116), Expect = 8e-18 Identities = 129/171 (75%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 7062 TGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TA 7120 ||||||||| ||| |||| | || | ||| ||||| ||||| ||||||||||| | || Sbjct 69569 TGGATTCCATGCACTCATAATTATCCTTCTGTCATTAGGATTA-TTTTTAATTTTATCTA 69627 Query 7121 TAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTAT-ATAA 7179 | | || ||| ||||| || || || || ||||| ||||| || | | | ||| Sbjct 69628 TCACATCTTTTAACTGATCAATTCCTTGTCCAGAATAATCTGTATG-CATTGTTTCATAT 69686 Query 7180 TTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 || |||||| |||||||||||||||| ||||||| || |||||||| ||| Sbjct 69687 TTTGCTCCATAATGTCTCCATTGAAAACCATAAACTGGCCCTAAATCTCCT 69737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595794112081200