Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq3126 91.5 8e-14 seq2008 91.5 8e-14 seq29 89.7 3e-13 seq1490 86.0 3e-12 seq198 84.2 1e-11 >seq3126 Length=109247 Score = 91.5 bits (100), Expect = 8e-14 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11443 TAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| |||| |||| | || || ||||||| |||||||||||||||||||| Sbjct 311 TAAAAAATAAAATAATTGGCTCGTGTGGGGGTCGAACCCACGACCTTCGCGTTATTAGCA 252 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| ||| |||||||||| | ||| Sbjct 251 CGACGCTCTAACCGACTGAGCTAACGAGCC 222 >seq2008 Length=177214 Score = 91.5 bits (100), Expect = 8e-14 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||| || |||||| | | |||| | || |||||||||| ||||||||||||||| Sbjct 164083 AGAAGAAAAAAAAAAATATAGTGGCTCGTGTGGGGATCGAACCCACGACCTTCGCGTTAT 164142 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAA 11523 |||||||||||||| ||| |||||||||| Sbjct 164143 TAGCACGACGCTCTAACCGACTGAGCTAA 164171 >seq29 Length=1158725 Score = 89.7 bits (98), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| |||||| | | |||| | || |||||||||| ||||||||||||||||||||| Sbjct 222429 AATTAAAAAT-ATAGTGGCTCGTGTGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 222487 Query 11501 GACGCTCTRACCAACTGAGCTAA 11523 |||||||| ||| |||||||||| Sbjct 222488 GACGCTCTAACCGACTGAGCTAA 222510 >seq1490 Length=259233 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 164951 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTAA 164896 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 166152 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTAA 166207 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 178768 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTAA 178823 >seq198 Length=600400 Score = 84.2 bits (92), Expect = 1e-11 Identities = 74/91 (81%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCC--ATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| ||||| || ||||||| ||| || ||||||| |||||| |||||||| ||| Sbjct 234614 AATGAAAAAAAAACTTGGCCCGCATGG--GGGTCGAACCCACGACCTCCGCGTTATCAGC 234671 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||| |||||||||||||| ||||| Sbjct 234672 ACGGCGCTCTAACCAACTGAGCTAACGGGCC 234702 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261457874335732