Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2640 165 7e-36 seq852 159 3e-34 seq1332 107 2e-18 seq1218 104 2e-17 >seq2640 Length=94256 Score = 165 bits (182), Expect = 7e-36 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||||| |||||||||| ||| ||||||||||| | ||||||||| Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAG-- 13208 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || || ||| || | ||| |||||| ||||||| | | ||||||||| || | Sbjct 13209 AGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGG 13268 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| || ||||| || | ||||||||||||||| | | ||||||| | || | Sbjct 13269 GAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTA 13328 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| ||||| || |||||||| |||||||||||||| Sbjct 13329 CTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 136 bits (150), Expect = 4e-27 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||||||||| |||||||||||| | || || || || || | || | Sbjct 12459 TTTGCATTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGT 12518 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || ||| || || ||||| || ||| |||| || | || || |||| Sbjct 12519 AGTCCGACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGAT 12578 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||||||||| ||||||||||| | ||||||||||| ||| | | ||||||| Sbjct 12579 CTGGAGGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCG 12638 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || || || || ||||| |||||||||||||| Sbjct 12639 GCTCTACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| ||||| | |||| |||||||| || || ||||| ||||| | || ||||| Sbjct 12238 TCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGA 12297 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 | ||| | || || ||||||||||| |||| || | ||| ||||| |||||||| Sbjct 12298 AAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGG 12357 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 ||||||||| ||||| | || || ||||||||| ||| |||||| | ||||| Sbjct 12358 AATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGAC 12417 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || ||||| ||||| | |||||||| || || ||||| Sbjct 12418 TTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||||| || | || || || ||||| | ||| ||||| | | ||||| || || Sbjct 12712 CACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATC--TGACAGTGTGCGACCGTCT 12769 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||| || | ||||| | | ||| ||||| || || |||||||||||||| Sbjct 12770 TCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCC 12829 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || ||||| || ||| ||||||| | | || || || | |||||||| Sbjct 12830 TGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTC 12889 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| |||||||| ||||||||||| Sbjct 12890 TTTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||| || | || || || ||||| | ||| |||||| | || || || ||| Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGG--AAAGGGTGCGACCATCT 13453 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||||| ||| | ||||| | | ||||||||| ||||| || ||||| ||||| Sbjct 13454 TCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCC 13513 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | |||||||||||||| ||| |||||| | ||||| || | |||||||| Sbjct 13514 TGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTC 13573 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || |||||||| Sbjct 13574 TTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 ||||||||| || |||| || |||| || ||||| ||||||| ||||| ||| Sbjct 13655 TTATAATCGGACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGC 13714 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 ||||| || ||||| || || ||||| | ||||||||||| ||| ||| || ||| Sbjct 13715 TGATCGGGTGGAATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCA 13774 Query 94949 GCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||| || || || | ||||| || || ||||| | |||||||| || |||||||| Sbjct 13775 -CTTGGTTCCACTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCAT 13833 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| || | ||||| || || | || | || ||||| || || | |||||| || Sbjct 12919 CATTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTC 12978 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 || ||| ||| || | |||||||| |||| || | ||| || ||||| || Sbjct 12979 CGACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGG 13038 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 |||||| ||||||||||| | |||||||| || || ||| || ||| | || Sbjct 13039 AGGAATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTC 13098 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | |||||||| |||||||| || || || || || |||||||| Sbjct 13099 CACTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 >seq852 Length=358492 Score = 159 bits (176), Expect = 3e-34 Identities = 188/251 (75%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 94760 GGTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTC 94818 |||||| |||| ||| || || |||| ||| || | |||||||| | |||||||| Sbjct 357394 GGTTTTAACAAATATTTGCATACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTC 357453 Query 94819 CTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| | ||||||||| ||| || || ||| || | || |||||| |||| Sbjct 357454 TTTTTGAATATTATAATCGG--ATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAA 357511 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 |||||||| || ||||| || || |||||||||||||| | ||| |||||||||||| Sbjct 357512 ATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTT 357571 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 | | || ||| | | || || || | ||| ||||||||||||||||||||||||||| Sbjct 357572 TCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACA 357631 Query 94997 AAGATCTGCAT 95007 || || ||||| Sbjct 357632 AATATTTGCAT 357642 Score = 114 bits (126), Expect = 1e-20 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||||||||| || | ||||| || | |||||||| || || | | Sbjct 357860 AAAATCTGCATTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATG 357919 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 |||||||| || |||| || || || || |||||| | || || || || || Sbjct 357920 TTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGT 357979 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || || ||||| ||||||||||| | ||| ||||| || || ||| ||||| Sbjct 357980 TGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTC- 358038 Query 94949 GCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||| || || || | || || || || ||||| |||||||| || || |||||||| Sbjct 358039 GCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 109 bits (120), Expect = 5e-19 Identities = 176/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 94761 GTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 ||||| |||| ||| || || || | ||||| | |||||| || | ||||||||| Sbjct 357623 GTTTTCACAAATATTTGCATCCCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCC 357682 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || || | ||| ||||| || |||| ||||| | |||||| ||| |||| || Sbjct 357683 TTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATC 357742 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 || | ||||| || || || || ||||| || || | ||||| ||||| ||| || Sbjct 357743 AAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCG 357802 Query 94940 ACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | ||| || || ||| || || || | || |||||||||||||| | || ||||| || Sbjct 357803 ATAGTATC-GCTTGGTTCTACCTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAA 357861 Query 94999 GATCTGCAT 95007 |||||||| Sbjct 357862 AATCTGCAT 357870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||| |||||||| ||||||||||| | |||||||| | || || || |||| Sbjct 357206 ACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAG--AAAGGGTGCGACCGTCCT 357263 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| || ||||| |||| || | || |||||||| || |||||||||||||| || | Sbjct 357264 CCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTT 357323 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTT 94975 ||||| || || || | | || || || || || || || | || || ||| Sbjct 357324 GGATTTTAGCTTTTACATTTTCTATGGTATC-GCTAGGTTCCACCTCTAAAGTTATAGTT 357382 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || ||||| ||||| || ||||| Sbjct 357383 TTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq1332 Length=188647 Score = 107 bits (118), Expect = 2e-18 Identities = 122/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||||||||| || | |||||||| | |||||||| |||| | Sbjct 169141 AAAATCTGCATTCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATA 169200 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||||||||| ||| || || ||| || | || |||||| |||| |||||||| | Sbjct 169201 TTATAATCG--GATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCT 169258 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||| || || |||||||||||||| | ||| ||||||| Sbjct 169259 GTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTTTGCCT 169300 >seq1218 Length=332501 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || ||||| |||||||| |||||||||| | ||| || || |||||||| ||||||||| Sbjct 114203 TCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTG 114144 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| ||||| || | | || ||| | | || || || | || || Sbjct 114143 TCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATA 114084 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| |||||||| ||||| || ||||| Sbjct 114083 GTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || ||||||| | | |||||||| || ||||||||||| || Sbjct 113748 ATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTT 113689 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||||| || || || | | |||||| | | || || || | |||||| Sbjct 113688 ATCTTGGATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGAT 113629 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||| || || || |||||||| |||||||| Sbjct 113628 GGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448232602736520