Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2898 145 1e-30 seq2388 136 6e-28 seq1752 118 2e-22 >seq2898 Length=65941 Score = 145 bits (160), Expect = 1e-30 Identities = 131/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| |||||||| | | ||| || |||||||||||||| |||||||| || || || Sbjct 41787 CGCTAAACGTCATCGTAAAGTTCTCCGCGATAACATCCAAGGTATCACCAAACCCGCCAT 41728 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| |||||||||||||||| || || ||| ||||||| ||| |||| ||||| | Sbjct 41727 TCGTCGTTTGGCTCGTCGTGGTGGTGTAAAACGTATCTCTGGTTTGATCTACGAAGAAAC 41668 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGC 16596 | | | ||| |||||| | ||| | ||| ||| |||| |||||| Sbjct 41667 TAGAGGTGTATTGAAGGTGTTCTTGGAGAACGTCATCCGTGATGC 41623 >seq2388 Length=175342 Score = 136 bits (150), Expect = 6e-28 Identities = 186/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || ||||| || | | ||| ||||||||||||| ||||| || || || || || Sbjct 58944 GCCAAACGTCACCGTAAAGTTCTAAGAGATAACATCCAGGGAATTACAAAACCCGCCATT 58885 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| |||| |||||||| |||||||||||| | || || ||| | || ||||||| | Sbjct 58884 CGTCGATTGGCGCGTCGTGGAGGAGTCAAGCGTATATCCGGTTTGATTTACGAAGAGACT 58825 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || || ||| | || || | | || ||| || ||| || || ||||| Sbjct 58824 CGCGGAGTATTAAAGGTTTTTCTGGAAAATGTCATCAGGGACGCTGTCACTTACACCGAA 58765 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| | ||||| ||||| | ||||| | || || || ||||||||||| || Sbjct 58764 CACGCTAAGAGAAAGACCGTCACTGCTATGGACGTGGTGTACGCTTTGAAACGTCAGGGA 58705 Query 16673 CGTAAGATTTATGGTTTTGG 16692 | | | || |||||||| Sbjct 58704 AGGACACTGTACGGTTTTGG 58685 >seq1752 Length=165541 Score = 118 bits (130), Expect = 2e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 16505 CGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTG 16564 ||||||||||| || || ||| ||||||| ||| |||| ||||| | | | | ||| ||| Sbjct 148813 CGTCGTGGTGGTGTAAAACGTATCTCTGGTTTGATCTACGAAGAAACTAGAGGTGTATTG 148754 Query 16565 AAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGT 16624 ||| | ||| | ||| ||| |||| |||||| | ||| ||||| || |||||| | Sbjct 148753 AAGGTGTTCTTGGAGAACGTCATCCGTGATGCCGTAACCTACACCGAACATGCTAAAAGG 148694 Query 16625 AAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTAT 16684 ||||| || || | ||||| | || ||||| ||||||||||||| | | | || Sbjct 148693 AAGACCGTTACTGCTATGGACGTTGTTTATGCTCTGAAACGTCAAGGAAGAACCCTCTAC 148634 Query 16685 GGTTTTGGAAGTTAA 16699 |||||||| ||||| Sbjct 148633 GGTTTTGGTGGTTAA 148619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065639091701