Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq725 127 2e-24 seq1427 102 9e-17 >seq725 Length=361488 Score = 127 bits (140), Expect = 2e-24 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| || || |||||||||||| |||||||| || ||||| | || ||||||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 |||||||||| |||| ||||| | ||| |||||||| || || || || || ||||||| Sbjct 94804 TTAACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATG 94863 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 |||| | ||||| || |||| || ||| |||||| ||| |||||| | | Sbjct 94864 CAACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAG 94923 Query 21678 CCTTTTCTTT 21687 ||||||||| Sbjct 94924 -CTTTTCTTT 94932 Score = 114 bits (126), Expect = 1e-20 Identities = 114/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACA-TTATCTTCtttttttGACATAATTCCCAT 21183 ||||||||||| ||||| | || ||| || | ||||||||||| | ||| | ||| Sbjct 90598 ATTTAAAAATCTGCATCAACTG-TAAAGCACTGTTCTTCTTTTTTCGCCATCACTCCACA 90656 Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 |||||||| || | ||| | ||||||||||||||||||||||||||||| || || Sbjct 90657 CTTTTGATACTCTCCCACTTTCTTTTCGAAAAAATTTGTCTTTCCTTCCAAAGAAATGTG 90716 Query 21244 TTCCATAAAATCAAATGGATTTTCA 21268 ||||| ||||| |||||||||||| Sbjct 90717 CTCCATGAAATCGAATGGATTTTCA 90741 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 21861 CCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAA 21920 |||| |||||||||||||| |||||||| || ||||| || || |||| || |||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 21921 AATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTT 21980 ||| ||| | ||| | || || ||||| | | ||| ||||| | || |||| Sbjct 98432 AATGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTT 98491 Query 21981 CTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATA 22040 ||||| ||||| || ||| ||| || || ||||| |||||||||| |||| Sbjct 98492 CTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATT 98551 Query 22041 TTATTGGAAATATTACAAA 22059 || ||||| || ||||| Sbjct 98552 CAATGGGAAAAATGACAAA 98570 >seq1427 Length=229792 Score = 102 bits (112), Expect = 9e-17 Identities = 216/317 (68%), Gaps = 8/317 (3%) Strand=Plus/Plus Query 131865 TGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAATAGATA 131924 ||||||||||| ||| ||| | || || || ||| ||||||| || | | | Sbjct 217312 TGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTTAAAA 217371 Query 131925 AATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAATTCATA 131984 ||| | | || |||||| | ||| | ||||||||||| || ||||| ||| |||||| Sbjct 217372 AATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTTCATA 217431 Query 131985 AAAAAGATAAT--GTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCATAA 132042 |||||| |||| | |||| ||||||||| ||| |||||||||||| | ||||| Sbjct 217432 AAAAAGGTAATACTTTTACA--TATTTTAGTCGAAGTTTAAAACCTGTACAACAGCATAA 217489 Query 132043 AATTGAT-GGATTTGATA-AACTGTTGACTGATGCATTTCCCACAGCAAAAAACTTCATT 132100 ||| || |||| | | | | | || | || |||| || |||| |||| ||| Sbjct 217490 AAT--ATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACTTGATT 217547 Query 132101 TTAGATGCGGAATTAATAATGATAGATACAAAATCAAATTCATTTTTACCATTTGGTTCA 132160 | || | ||| | | | ||||||||||| || || | || ||||||||| | Sbjct 217548 CTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTACT 217607 Query 132161 TTAGGTATACATAAAAA 132177 |||||| | || || || Sbjct 217608 TTAGGTGTTCACAAGAA 217624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531831273916680