Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1427 172 7e-38 seq1105 134 2e-26 seq725 113 6e-20 seq224 104 3e-17 seq8822 95.1 2e-14 seq546 84.2 3e-11 >seq1427 Length=229792 Score = 172 bits (190), Expect = 7e-38 Identities = 681/1042 (65%), Gaps = 46/1042 (4%) Strand=Plus/Plus Query 156555 GTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCGTTT 156614 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 156615 AAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTT 156674 ||||||| ||| || |||| ||| || | ||||| ||||| ||| | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 156675 CATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCAT 156734 |||||||| ||| ||| | | |||||| ||| | ||||| |||| ||| Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 156735 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCGT 156793 ||| | || ||||||| ||||| | ||||| ||| || || | | | || | | Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACT-TGAT 217546 Query 156794 ATTGGATTCTGAAATTGTTCTTGTAG--ACGAACATA-ATGTACCGCTCCCGTTTGGAAG 156850 | || ||||||||| | || ||| || || | | || ||| | || ||||| | Sbjct 217547 TCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 156851 TTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 156910 |||||| | ||||| |||| | | ||| | | | | ||||| || |||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 156911 CTGTTTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTT 156970 ||| | || | ||||| ||| | | ||| ||| | | ||| || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 156971 TCTCAAAGATGTTATGGTTGAAATACCCAATAGAATAGTATTCTCAGAGTTGACGAATAT 157030 ||| |||| ||||| ||| | || || ||| || || ||| ||| | Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGA--AAT-T 217783 Query 157031 TAGTAA----CGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTAACGAGAAA---A 157082 || ||| ||| | |||| ||| ||| ||||| || || | | | | Sbjct 217784 TATTAAAACTCGA-AAAGAATTAAATGA--TAT--GATGACATCAATATTCAAACAAGGA 217838 Query 157083 TTAGAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGAT 157140 ||||||||| | || ||||||| || || ||||| || |||| ||||| || | Sbjct 217839 TTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAAACGACATT 217896 Query 157141 GGTTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAG 157200 || | ||| | || ||| ||| | | |||||| |||||| || ||| ||||||| Sbjct 217897 GGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAG 217956 Query 157201 TAGTACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATCATGGCAGTCTTTCTA 157259 | || ||||||| || | ||||| || || ||| ||||| || ||| || | ||| || Sbjct 217957 TTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAA-GGTGGAATGATGTCAATTTTTTTA 218015 Query 157260 ATGGGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTTAC-CAAGT--GTTCAGGA 157316 |||||||| | ||| | |||| || ||| || ||||| |||| | |||| Sbjct 218016 ATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAAGTACATGGAGGA 218075 Query 157317 CACGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAG 157376 || |||| ||| || ||| ||||| ||||| ||| ||||||| Sbjct 218076 CATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAAT 218135 Query 157377 GATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCCGATTTTG- 157434 || || | | || || | ||||| ||||| ||||||| | ||||| ||||||| Sbjct 218136 GA---CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTGT 218191 Query 157435 TAGTAGAGGATCCGAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTT---TACAT 157491 | ||| | ||||| ||| ||| ||| ||||||| ||| |||||||||| || || | Sbjct 218192 TTGTA-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAAG 218250 Query 157492 CTTCCAAGTCCCATACCGCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATTA 157551 || ||| | ||||| ||| |||||||| || || |||||| | ||||| ||| Sbjct 218251 CT--GAAG-CTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTC 218304 Query 157552 GAGAAGATAAAACGTGGAAAGA 157573 | | |||||||| |||||||| Sbjct 218305 GTTATGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 134 bits (148), Expect = 2e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 62063 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 62122 |||||| |||||||||||||| |||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 62123 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 62182 | ||| ||||||||||| ||||| || ||||||||||||||||| || || || | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 62183 TTGTGGAATTTCCCAAATAGTTTTATA 62209 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 63165 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63224 ||||||| |||||||| |||||||||||||||||| | ||| | | |||| || | Sbjct 85885 AATCCAGAACATTCATGAGGACACATCAACGACCACATATCATCAGCTTCAACTCTTTGC 85826 Query 63225 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63284 ||||| | ||| ||||||||||| || ||||| ||| | | | | ||| || ||| Sbjct 85825 ATAAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTT 85766 Query 63285 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63344 || ||||| ||||| | ||| || || | | |||||| | |||||||||||||| ||| Sbjct 85765 CCGGTATTTTTTTTTAAATCAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATAT 85706 Query 63345 ATGGC 63349 || || Sbjct 85705 ATAGC 85701 Score = 105 bits (116), Expect = 8e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 |||||| ||||||| || || |||| | | |||||||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 | || |||||||| ||||| || || | |||| | | ||||||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 62748 CTATGTCTCTTATTAGAGATTTCAGC 62773 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 ||| |||||||| || | |||||| ||||| || ||||| ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 62456 ACTATTTCTAAGACCGTA 62473 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 >seq725 Length=361488 Score = 113 bits (124), Expect = 6e-20 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || |||| ||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 | |||||| || | || || ||||||||||||||||||||||| ||||| ||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 33448 ATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 33504 | || | |||||| | || | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 33505 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 || |||| || || || | || ||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||| ||||| || ||||| || ||||| || || |||||||| |||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 33746 AATATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACT 33804 ||| ||||| || | | || | | ||||| | | ||| || || | || ||| Sbjct 98432 AATGCTTTTCATCATCATTCAAGAGT-TCCCAATGAGAAAGATCCTTTGAAAGGTCAACT 98490 Query 33805 TCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATAT 33864 ||||| || ||||| ||||| || || || || || ||||| | |||||| ||| |||| Sbjct 98491 TCTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATAT 98550 Query 33865 TGGATTGGGAAAATAACAAATCTATTTGGATTT 33897 | || || ||||| ||||| | |||||||| Sbjct 98551 TCAATGGGAAAAATGACAAAGCGTCTTGGATTT 98583 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 32989 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33048 |||| || | ||| ||||| ||||| || || ||||| |||||||||||||| Sbjct 90634 TCTTTTTTCGCCATCACTCCACACTTTTGATACTCTCCCACTTTCTTTTCGAAAAAATTT 90693 Query 33049 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATA 33104 || ||||||||||| || || | ||||||||||| || ||||| ||||||||| Sbjct 90694 GTCTTTCCTTCCAAAGAAATGTGCTCCATGAAATCGAATGGATTTTCAACATTATA 90749 >seq224 Length=538787 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663 |||| ||||||||| || ||||||||||| |||||||| ||||| || || | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 62664 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62723 | | |||||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCT 62755 ||||| |||| ||| || || || | || ||| Sbjct 19566 CCTTGTACACTAATTCCTATTGGACGATATCT 19597 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 62061 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 62120 ||||| | |||||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 62121 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTC 62180 | || || || |||||||| || || || || || |||||||||||||| || || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 62181 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq8822 Length=1639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671 ||||| |||||||| | || || ||||| || ||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 63672 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63731 || || ||||| || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 63732 ATGTGCTGAGGTCTTTC 63748 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 86/112 (77%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 28477 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 28536 ||||||||||| | |||||||||||| || || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 28537 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 28585 |||||||||||| || ||||| | ||| ||| || | ||||||| || Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAAT 78898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622865773014120