Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq852 131 2e-25 seq2640 129 6e-25 seq1332 98.7 1e-15 seq1218 95.1 1e-14 >seq852 Length=358492 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || ||||| ||||||| || | || || | || |||| || Sbjct 358101 AAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCA 358042 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | |||||| |||||| | || ||| ||||||| ||||||||||| || || ||||| Sbjct 358041 AGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGAC 357982 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| || | |||| || ||| || ||||||||||| | | | | | || ||| Sbjct 357981 CAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTAT 357922 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||| ||||||||||| | ||| |||| || | | |||||||||| Sbjct 357921 AACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGGAA 357870 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | ||||||||| | || || | ||| | ||| | | Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | ||||| ||||||| ||||||||||| ||||| ||||||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | |||| | ||| || ||| | ||||||| | | | | | ||| ||||| Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 26949 ATTCAAAAAGAATCTAC 26965 ||||||||||||||||| Sbjct 357462 ATTCAAAAAGAATCTAC 357446 >seq2640 Length=94256 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || ||||| ||| | |||||||| | |||||| | ||| | || | | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||||||| | || ||| ||| || ||||||||||| || ||||| |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| |||| | || |||||| | ||||||| | | | | ||||||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| |||||||| || ||||||| || |||||| | | || |||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAA 12921 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || | || || || | |||||| | ||| | ||| | | Sbjct 13606 AATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAG 13547 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| | ||||| ||| || ||||| ||||| || ||||||||||| Sbjct 13546 TGACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCA 13487 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || ||| |||||| | ||||||| | | | | | ||| || || Sbjct 13486 GCAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAA 13427 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||||||| || || | |||||||| || || ||| | || |||| Sbjct 13426 CATTCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCTTCGTGGTGGAA 13377 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || |||||| | || ||||| | ||||| | ||| | || | | Sbjct 12922 AATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAG 12863 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| | || || |||||| ||||||||||| ||||| |||||||| Sbjct 12862 TGACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCA 12803 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTAT 26945 |||| | || || | || || ||||| || ||||| | | | | || |||| || || Sbjct 12802 ACAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCA--GATTAC 12745 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||| || || | |||||||| || |||||| | || || Sbjct 12744 AACATCCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGACTTCGTGGCGG 12695 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || |||||||| ||||| ||| | || || | ||| | || | | Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| |||||| | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACG---TCAGCGACTA 26944 || ||||| |||| | || ||||| || ||||| | | | || |||| | || Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCA-CGCTTTCAG--ATTA 12290 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || |||||||||||||| || | || |||| ||| | || ||||| ||||| Sbjct 12289 CAATATTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGGAAA 12236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| | || ||||| | ||||| | ||| |||| | | Sbjct 13378 AATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAG 13319 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | ||||| ||| || || ||||| || || || || ||||| Sbjct 13318 TGACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCA 13259 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | | ||| || || | ||||||| | | | | || || ||||| Sbjct 13258 GCAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAA 13199 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| ||||| ||| | || |||| || |||| ||||| || Sbjct 13198 CATTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGG 13151 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | |||||||||||| | || || || | ||||| | ||| |||| | | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || ||| || ||||||||||| || ||||| |||||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || || || || | | ||| || || || ||||| | | |||| | ||||| || Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACG-GACGCACGTTGTCGGACTACAA 12515 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA---AAATAT 27003 || || ||||| || || | || |||| ||||| | |||||||||| |||||| Sbjct 12514 TATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAATGCAAATAT 12456 >seq1332 Length=188647 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || | ||||||| ||||||||||| ||||| ||||||||| Sbjct 169319 GACACCATAGAAAACGTATAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 169260 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | |||| | ||| || ||| | ||||||| | | | | | ||| ||||| Sbjct 169259 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 169200 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||||||||||| | || |||| || | | |||||||||| Sbjct 169199 ATTAAAAAAGAATCTACACTTCACTTGGTTCTTCGTTTGAGAGGAGGAA 169151 >seq1218 Length=332501 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| || ||||| || | || ||| | ||| | || ||| Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || ||| |||||| || |||||||| || || || ||||| Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTAT 26945 ||| | || || | | ||||| || || ||||||| ||| | ||||| | ||| Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAG--ATTAT 113997 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 |||||||| |||||||| || | ||| |||| || || Sbjct 113998 AACATTCAGAAAGAATCGACACTTCATTTGGTTCTTAG 114035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | || ||||| | || || | ||| |||| | | | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || ||| ||||||||||| || || ||||| ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | || || || | ||||| | | | | | |||||| || Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| ||||| || || | ||| | || || ||||| ||||||||||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGAAA 114506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478599832841040