Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1105 93.3 1e-13 seq725 93.3 1e-13 seq665 89.7 1e-12 >seq1105 Length=277015 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || |||||||| ||||| || || ||||| ||||||||||| |||||||| | Sbjct 85692 GGTGCCTTTGCTATATATCTGGAACCGTGGCATGCAGATATTTTTGAATTTCTTGATTTA 85751 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||||| || ||||| || |||| ||||| |||||| | || |||||||||||| || Sbjct 85752 AAAAAAAATACCGGAAAGGAAGAATGTCGTGCTCGTGATTTATTTTATGCACTTTGGATT 85811 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 | || |||||| | | || || || | | | | ||||| | | || || || Sbjct 85812 CCCGATTTATTTATGCAAAGAGTTGAAGCTGATGATATGTGGTCGTTGATGTGTCCTCAT 85871 Query 364018 GAATGT 364023 |||||| Sbjct 85872 GAATGT 85877 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 364123 TGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGAT 364182 ||||||||||| | | || |||||||| || ||||| || || ||| |||| |||||| Sbjct 90665 TGGTTTGCCATTTTACAGTCTCAGATTGAAACTGGAACTCCTTACATGGTGTATAAAGAT 90724 Query 364183 TCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGT 364242 | || || || || || || || || |||| ||||||||| | ||||| ||||| Sbjct 90725 GCATGTAATCGTAAATCTAATCAACAAAACCTCGGTACAATTAAATGCAGCAATTTATGT 90784 Query 364243 ACCGAGATTATTGAATACACCGCTCCCGACGA 364274 || || || ||||||| | | | || ||||| Sbjct 90785 ACTGAAATAGTTGAATATAGCTCACCAGACGA 90816 >seq725 Length=361488 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 22481 CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCAT 22540 |||| | |||||| || |||||||||| | || ||||| || |||||||||||| | | Sbjct 94884 CATTTGGAGAACGTGTTGTTGCATTTGCGGCAGTCGAAGGAATCTTCTTTTCTGGATCGT 94825 Query 22541 TTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATG 22600 || ||||| |||||| ||||||| | | ||||||| || |||| || |||| Sbjct 94824 TTGCAGCAATTTTTTGGTTAAAAAAGAGGGGTCTTATGCCTGGATTAACATTCAGTAATG 94765 Query 22601 AGTTAATTAGCCGAGATGA 22619 | ||||| ||| ||||||| Sbjct 94764 AATTAATCAGCAGAGATGA 94746 >seq665 Length=373109 Score = 89.7 bits (98), Expect = 1e-12 Identities = 128/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 111316 TTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGT 111375 |||| ||| | ||||| || || || ||||| ||| | || ||||||||||| |||| Sbjct 78464 TTCCTCTTTTGACAACTAAACGGGTATTTTGGAGAGGAGTAGTTGAAGAACTTCTATGGT 78405 Query 111376 TTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAA---AATGTAAAAATTTGGG 111432 |||| || || ||||| |||||||||||| | | | ||| ||| | ||||||| Sbjct 78404 TTATACGTGGCAGTACCAATGCAAATGAATT---AACTAAAGCTGGTGTGCACATTTGGG 78348 Query 111433 ATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGT 111491 ||| ||||||| ||| || | | |||| ||| | || || || | ||||||||| Sbjct 78347 ATGCAAATGGAAGACGAGAATATTTAGACTCACTAGGACTGACAGAAAGAGAAGAAGGT 78289 Score = 87.8 bits (96), Expect = 5e-12 Identities = 124/173 (72%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||| ||| | || |||||||| || ||||||||| | || | ||| ||| | || |||| Sbjct 69737 AGGAGATTTAGGGCCAGTTTATGGTTTTCAATGGAGACATTATGGAGCAAAATATGAAAC 69678 Query 111548 CATGCACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCA 111604 ||||| || || |||| ||| |||| |||||| ||| | |||| || ||| | Sbjct 69677 AATGCATA---CAGATTATTCTGGACAAGGAATTGATCAGTTAAAAGATGTGATAGATAA 69621 Query 111605 AATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAA 111657 |||||| || || || | | | | || ||||||||||||||||| |||| Sbjct 69620 AATTAAAAATAATCCTAATGACAGAAGGATAATTATGAGTGCATGGAATCCAA 69568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303178976277374