Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1218 111 1e-19 seq2640 107 2e-18 >seq1218 Length=332501 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || || || || | |||||| || ||||| || || || |||||||||| Sbjct 114503 CCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAA 114444 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| ||||| || || || ||| | || || | ||||||||| || Sbjct 114443 AGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGA 114384 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| ||||| ||| || || | | | ||||||| |||||| Sbjct 114383 ATGCCTTCTTTGTCCTGAATTTTAGCT--TTTACATTTTCTATTGTGTCGCTGGGCTCTA 114326 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| |||||||||||||| || ||||| Sbjct 114325 CTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || || | ||| || || |||||||| || || |||||||| | | Sbjct 113819 CCACCACGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGAC 113760 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||||||| | || || ||||| || || || Sbjct 113759 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGA 113700 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || |||| ||| ||||| | | | ||||| | |||||| Sbjct 113699 ATACCTTCCTTATCTTGGATTTTGGCT--TTCACATTCTCTATCGTGTCACTGGGCTCTA 113642 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| ||||| || || |||||||||||||| Sbjct 113641 CCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||| || || || |||||||| || | | ||| |||| |||| |||| Sbjct 114251 TGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGT 114192 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || |||||| | || | || |||||||| ||| | ||| |||||||| ||||| Sbjct 114191 TTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTTTA 114132 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | || || | ||| || ||| | || || ||||| || ||| Sbjct 114131 GCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTC 114072 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || ||||||||||| || |||||| Sbjct 114071 AGAGTTTTGACAAATATTTGCATT 114048 >seq2640 Length=94256 Score = 107 bits (118), Expect = 2e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||||||| | ||| || ||||| || || || ||||| ||||| | || || | Sbjct 12935 CTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGACAGAGTACGACCA 12994 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || |||||||| || ||| ||||||| | |||||| || ||| | || |||||| Sbjct 12995 TCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCCTTCTTTG 13054 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || |||||| || || | | | || || | |||||| ||||| ||||| Sbjct 13055 TCTTGGATTTTTGCT--TTTACATTCTCGATGGTATCACTCGGCTCCACTTCCAGGGTGA 13112 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| || || || ||||||||||| Sbjct 13113 TGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| ||| || || ||||| ||||| |||||||| |||| Sbjct 13379 CCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAA 13438 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || ||||||||||| || || | || || || || || || ||| Sbjct 13439 AGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGG 13498 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || ||||| ||| || | | | ||||| | || || Sbjct 13499 ATTCCTTCCTTGTCCTGGATTTTTGC--CTTGACATTTTCGATTGTGTCACTCGGTTCGA 13556 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||| || ||||| || || ||||| |||||||||||| Sbjct 13557 CTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405036373686430