Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1427 170 2e-37 seq1105 140 4e-28 seq725 131 2e-25 seq224 104 3e-17 seq8822 98.7 1e-15 seq546 84.2 3e-11 >seq1427 Length=229792 Score = 170 bits (188), Expect = 2e-37 Identities = 681/1043 (65%), Gaps = 48/1043 (5%) Strand=Plus/Plus Query 155183 GTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTT 155242 ||| ||||||| || || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 155243 AAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTT 155302 ||||||| ||| || |||| |||||| | ||||| ||||| || | || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 155303 CATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTTAT 155362 |||||||| ||| ||| | | |||||| ||| | ||||| |||| || Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 155363 AAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCGT 155421 ||| | || ||||||| ||||| | ||||| ||| || || | | | || | | Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACT-TGAT 217546 Query 155422 ATTGGATTCTGAAATTGTTCTTGTAG--ACGAACATA-ATGTACCGCTCCCGTTTGGAAG 155478 | || ||||||||| | || ||| || || | | || ||| | || ||||| | Sbjct 217547 TCTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTAC 217606 Query 155479 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 155538 ||||||| | ||||| |||| | | ||| | | | | ||||| || |||||||| Sbjct 217607 TTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGA 217666 Query 155539 CTGTTTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTT 155598 ||| | || | ||||| ||| | | ||| ||| | | ||| || || | Sbjct 217667 TTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAAT 217726 Query 155599 TCTCAACGATGTTATGGTCGAAATACCCAATAGAATAGTATTCTCAGAGTTGACGAATAT 155658 ||| | || ||||| ||| | || || ||| || || ||| ||| | Sbjct 217727 TCTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGA--AAT-T 217783 Query 155659 TAGTAA----CGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTAACGAGAAA---A 155710 || ||| ||| | |||| ||| ||| ||||| || || | | | | Sbjct 217784 TATTAAAACTCGA-AAAGAATTAAATGA--TAT--GATGACATCAATATTCAAACAAGGA 217838 Query 155711 TTAGAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGAT 155768 ||||||||| | || ||||||| || || ||||| || |||| ||||| || | Sbjct 217839 TTAGAAGGACTTGTTTTAAAAG--ATCCATTGAGTACTTATAAACCTGGAAAACGACATT 217896 Query 155769 GGTTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAG 155828 || | ||| | || ||| ||| | | |||||| |||||| || ||| ||||||| Sbjct 217897 GGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAG 217956 Query 155829 TAGTACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATTATGGCAGTCTTTCTA 155887 | || ||||||| || | ||||| || || ||| ||||| || ||| || | ||| || Sbjct 217957 TTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAA-GGTGGAATGATGTCAATTTTTTTA 218015 Query 155888 ATGGGTTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTC----AGG 155943 |||||||| | |||| | |||| || ||| || || |||||| || | ||| Sbjct 218016 ATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGG 218074 Query 155944 ACACGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAA 156003 ||| |||| ||| || ||| ||||| ||||| ||| ||||||| Sbjct 218075 ACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAA 218134 Query 156004 GGATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCCGATTTTG 156062 || || | | || || | ||||| ||||| ||||||| | ||||| ||||||| Sbjct 218135 TGA---CACAGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTG 218190 Query 156063 -TAGTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTT---TACA 156118 | ||| | ||||| ||| ||| || ||||||| ||| |||||||||| || || | Sbjct 218191 TTTGTA-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAA 218249 Query 156119 CCTTCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATT 156178 || ||| | |||||||| |||||||| || || |||||| | ||||| ||| Sbjct 218250 GCT--GAAG-CTCATACAGC---AGGAATATCAATAAGGTTTCCTCGTGTTACTTTAATT 218303 Query 156179 AGAGAAGATAAAACGTGGAAAGA 156201 | | |||||||| |||||||| Sbjct 218304 CGTTATGATAAAACTTGGAAAGA 218326 >seq1105 Length=277015 Score = 140 bits (154), Expect = 4e-28 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 61918 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 61977 |||||| |||||||||||||| |||| || |||| | || ||||| ||||| || || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 61978 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTT 62037 | ||| ||||||||||| ||||| || ||||||||||||||||| || ||||| | || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 62038 TTGTGGAATTTCCCAAATAGTTTTATA 62064 ||| || |||||||||| |||| |||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATA 102510 Score = 118 bits (130), Expect = 1e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 63022 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63081 ||||| |||||||| |||||||||||||||||| | ||| | | |||| || ||| Sbjct 85883 TCCAGAACATTCATGAGGACACATCAACGACCACATATCATCAGCTTCAACTCTTTGCAT 85824 Query 63082 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63141 ||| | ||| ||||||||||| || ||||| ||| | | | | ||| || ||||| Sbjct 85823 AAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCC 85764 Query 63142 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63201 ||||| ||||| | ||| || || | | |||||| | |||||||||||||| ||||| Sbjct 85763 GGTATTTTTTTTTAAATCAAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATAT 85704 Query 63202 GGC 63204 || Sbjct 85703 AGC 85701 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482 |||||| ||||||| || || |||| | | |||||||||||||| || | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 | || |||||||| ||||| || || | |||| | | || |||| | || ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602 || ||||| | | |||||| | || ||||| |||||||||||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 62603 CTATGTCTCTTATTAGAGATTTCAGC 62628 | ||| |||| |||||| | ||| || Sbjct 91135 CGATGCCTCTGATTAGATAATTCTGC 91110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| |||||||| || || || ||||| | ||||||||||| || || ||||| | Sbjct 100936 TACCTGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTAT 100877 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || |||||||| || | |||||| ||||| || ||||| ||||| |||| || | || Sbjct 100876 CGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAA 100817 Query 62311 ACTATTTCTAAGACCGTA 62328 ||||||||| | ||| || Sbjct 100816 ACTATTTCTTACACCATA 100799 >seq725 Length=361488 Score = 131 bits (144), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || |||||||| || || || | ||| ||||| || || | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 32804 | |||||| || | ||||| |||||||||||||| |||||||| ||||||||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 32805 ATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCC 32861 | || | |||||| | || | |||| |||||| ||| ||||| || || Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 32862 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899 || |||| || || || | ||||||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 123 bits (136), Expect = 3e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 ||||||||||| ||||| || ||||| || ||||| || || |||||||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 33105 TATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 33163 | ||||| || | | || | | ||||| | | ||| || || | || ||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGT-TCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTC 98492 Query 33164 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 33223 ||| || ||||| ||||| || || || || || ||||| | |||||| ||| |||||| Sbjct 98493 TTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTC 98552 Query 33224 AATTGGAAAAATAACAAATCTATTTGGATTTT-TTGCAAGGATTGGTTC 33271 ||| |||||||| ||||| | ||||||||| | |||| | |||||| Sbjct 98553 AATGGGAAAAATGACAAAGCGTCTTGGATTTTCTCGCAA-CAGTGGTTC 98600 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 32346 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405 |||| || | ||| ||||| ||||| || || ||||| |||||||||||||| Sbjct 90634 TCTTTTTTCGCCATCACTCCACACTTTTGATACTCTCCCACTTTCTTTTCGAAAAAATTT 90693 Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATA 32461 || || ||||| || || || | |||||||||||||||||||| ||||||||| Sbjct 90694 GTCTTTCCTTCCAAAGAAATGTGCTCCATGAAATCGAATGGATTTTCAACATTATA 90749 >seq224 Length=538787 Score = 104 bits (114), Expect = 3e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 61916 CTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATA 61975 ||||| | |||||||||||||| || | || |||| | |||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 61976 TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTC 62035 | || || || |||||||| || || || || || |||||||||||||| ||||| Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 62036 TTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 ||||| || |||||||||| |||| |||| | | || | ||| ||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 62459 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62518 |||| ||||||||| || ||||||||||| |||||||| ||||| || || | ||| Sbjct 19446 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTC 19505 Query 62519 AGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 62578 | | || ||||| |||||||| ||||| | | |||||||| || || |||||| Sbjct 19506 AACTTCTGTGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAAT 19565 Query 62579 CCTTGAACACCAATACCGATAGGTCTATGTCT 62610 ||||| |||| ||| || || || | || ||| Sbjct 19566 CCTTGTACACTAATTCCTATTGGACGATATCT 19597 >seq8822 Length=1639 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 ||||| |||||||| | || || ||||| |||||||||||||||||||| | || || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || ||||| || | || || || || ||| ||||| || | || ||||| ||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 63587 ATGTGCTGAGGTCTTTC 63603 || ||||| |||||||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 >seq546 Length=477121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 27527 ACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTATTATCA 27586 |||||||||| | ||||||||||||||| || ||||| | ||| | |||| |||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 27587 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATATCTATATAT 27643 |||||||||||| || ||||| | ||| ||| || | ||||||| || | || | Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAATTGAGATTT 78906 Query 27644 CTCAC 27648 || || Sbjct 78907 CTTAC 78911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633549176377200