Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2640 159 3e-34 seq1218 143 2e-29 seq852 136 3e-27 seq1332 113 4e-20 seq381 87.8 2e-12 >seq2640 Length=94256 Score = 159 bits (176), Expect = 3e-34 Identities = 168/218 (77%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || |||||||| |||| || || ||||||| | ||||||||| || | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || |||||| | || ||||||||| || ||||||||||| ||||| ||||| Sbjct 13089 GATACCATCGAG--AATGTAAAAGCAAAAATCCAA-GACAAAGAAGGAATTCCTCCTGAT 13033 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | |||||||||| || |||||||||||||||| ||| ||| || || || Sbjct 13032 CAACAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTAT 12973 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 || ||||| ||||||||||| || ||| |||| || || Sbjct 12972 AACATTCAGAAAGAATCCACACTCCATCTAGTACTGAG 12935 Score = 156 bits (172), Expect = 4e-33 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||||||||| || || || ||||| |||||| | || ||| | ||||| ||| || Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| |||||| | ||| || || ||||| ||||| ||||| || ||||| Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | |||||||||| || ||||| ||||||| | ||||| | |||||||| Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAA 12287 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||||||||||||| |||| || || || | || ||||| |||||||| Sbjct 12286 TATTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGGAAATTA 12233 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | |||||||| ||||||| | ||||| || || Sbjct 13606 AATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAG 13547 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| ||||| | ||| ||||||| ||||| ||||| || || || || || Sbjct 13546 TGACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCA 13487 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || || ||||| |||||||| ||||||| |||||| | ||||||||| Sbjct 13486 GCAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAA 13427 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||||||| || || || ||| | ||||| ||||| | || |||| Sbjct 13426 CATTCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCTTCGTGGTGGAA 13377 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||| || | || || || ||||||| | ||||| ||| || | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| |||||| ||||||||||| ||||| || || ||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || ||||||| | ||||| || || |||||| Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAAT 12514 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || ||||| ||||| || || || ||| | || | |||||||||| Sbjct 12513 ATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAA 12465 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | ||||| || ||||||| | ||||||||| | Sbjct 12922 AATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAG 12863 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||||||| | ||| | || | ||| ||||||||||| || ||||| || | Sbjct 12862 TGACACTATCGAAAATGTAAAGGCTAAGATTCAG-GACAAAGAAGGTATACCACCCGATC 12804 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || || || || ||||| ||||||| | |||||| || ||||||| Sbjct 12803 AACAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACA 12744 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 | || |||||||| || || || ||| | ||||| || || Sbjct 12743 ACATCCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGACT 12704 >seq1218 Length=332501 Score = 143 bits (158), Expect = 2e-29 Identities = 175/236 (74%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || || | ||||| || | || ||| | ||||| ||| | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || |||| |||| ||| ||||||||||| ||||| || ||| Sbjct 114337 GACACAATAGAA--AATGTAAAAGCTAAAATTCAG-GACAAAGAAGGCATTCCGCCCGAC 114393 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | | || ||||| || || || || ||||| | ||| ||| | ||| ||| Sbjct 114394 CAACAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTAC 114453 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||| ||||| || || || |||||||| || || || |||||||||||||| Sbjct 114454 AATATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGAAATTA 114509 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| || ||| |||| || ||| | || || | ||||| || | Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | ||| | |||| ||| ||||||||||| ||||| || |||| Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAG-GACAAAGAAGGCATTCCTCCCGACC 114166 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || ||||| || |||||| | ||||| | ||||| | ||||||| Sbjct 114167 AACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACA 114226 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || |||||||||||||| || Sbjct 114227 ACATCCAGAAAGAATCCACGCTTCA 114251 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 113593 ATGCAGATTTTTGTGAAGACCCTGACGGGAAAGACCATCACGCTGGAGGTAGAGCCCAGT 113652 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| |||| |||||| || || ||||| ||||||||||| || Sbjct 113653 GACACGATAGAGAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAG 113712 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | || |||| ||||| || || |||||| Sbjct 113713 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCAGACTACAAT 113772 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || || || || || ||| | || || || || | || |||| Sbjct 113773 ATCCAGAAGGAGTCGACCCTCCATCTCGTTCTCAGACTCCGTGGTGGAA 113821 >seq852 Length=358492 Score = 136 bits (150), Expect = 3e-27 Identities = 161/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || ||| | || || ||| |||| || | ||||| || | | Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | ||||| | ||| ||||||||||| || || || || Sbjct 357582 GATACCATAGAAAACGTCA---AGGCAAAGATTCAA-GACAAAGAAGGTATACCGCCCGA 357527 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | ||||||||||| || ||||||||||||| |||||| | |||||| Sbjct 357526 TCAACAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTA 357467 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||||||||| ||||| || || || || Sbjct 357466 TAATATTCAAAAAGAATCTACGCTTCACTTGGTACT 357431 Score = 123 bits (136), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || ||| | || || || | || || | || || ||| | Sbjct 358099 AATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCAAG 358040 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| |||||| | || ||||||| | ||| ||||||||||| ||||| || || Sbjct 358039 CGACACAATCGAG--AATGTAAAAGCAAAGATTCAA-GACAAAGAAGGCATTCCGCCCGA 357983 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| || | ||||| ||||| || ||| | ||||| | ||||||| || ||||| Sbjct 357982 CCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTA 357923 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| |||||||| || || ||||| || || | | |||||||||| Sbjct 357922 TAACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGGAA 357870 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| || || || ||| |||| || | || || || | Sbjct 357871 AATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAG 357812 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || |||||||| | ||| |||||| || || ||||| || || |||||||| Sbjct 357811 CGATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCA 357752 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||||||||| ||||| ||||| || | ||||||| || |||||||| Sbjct 357751 GCAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAA 357692 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 || || || ||||| ||||| ||||| ||||| || Sbjct 357691 CATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAG 357656 Score = 111 bits (122), Expect = 1e-19 Identities = 168/236 (71%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || || |||| |||||| | || || | || ||||| | Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| || || |||||||| ||||||||||| Sbjct 357354 GATACCATAGAA--AATGTAAAAGCTAAAATCCAA-GATAAAGAAGGTATTCCACCTGAT 357298 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||||||||| || || ||||| || || | |||||| | ||||| Sbjct 357297 CAGCAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTAT 357238 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||||| ||||| |||||||| | ||| | || || | || | || |||||||| Sbjct 357237 AATATCCAAAAGGAATCCACTTTGCATCTGGTACTTCGTCTTCGTGGTGGAAATTA 357182 >seq1332 Length=188647 Score = 113 bits (124), Expect = 4e-20 Identities = 115/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 25079 GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGG 25138 ||||| | ||| ||||||||||| || || || || |||||| | | ||||||||||| Sbjct 169298 GCAAAGATTCAA-GACAAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGG 169240 Query 25139 CAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCT 25198 || ||||||||||||| |||||| | |||||| |||||| |||||||||| || || Sbjct 169239 AAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACT 169180 Query 25199 ACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || || | | |||||||||| Sbjct 169179 TCACTTGGTTCTTCGTTTGAGAGGAGGAA 169151 >seq381 Length=560238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| || || ||||| || || || | |||||||| || |||||||||||||||| || Sbjct 529323 AGGTATCCCTCCTGATCAGCAACGTTTAATTTTTGCTGGAAAACAATTAGAAGATGGACG 529264 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || || ||||| || |||||||| |||||||| ||||| | || |||| |||| Sbjct 529263 TACATTGTCTGATTATAACATTCAAAAGGAATCCACTTTACATCTTGTTTTAAGATTAAG 529204 Query 25220 AGGAGG 25225 ||| || Sbjct 529203 AGGTGG 529198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433272774648455