Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq2640 125 6e-24 seq852 125 6e-24 seq1218 113 4e-20 >seq2640 Length=94256 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| || || || |||| || || ||||| ||| ||||| ||| || || Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | |||||| |||||| ||||||||||| |||| |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || ||||||| ||| || |||||||| |||||| | ||| || | || ||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||| ||||| ||| |||| || | |||| ||||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGG 12923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| ||||| || | ||||| || ||||| ||| ||||| ||||| || Sbjct 13606 AATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAG 13547 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | | | | || || |||||| ||||| ||||| | || |||||| Sbjct 13546 TGACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCA 13487 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || || | || || ||||||||||||||| | || | ||||||| || Sbjct 13486 GCAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAA 13427 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||| || || || ||| | ||| | | || || ||||| Sbjct 13426 CATTCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCTTCGTGGTGG 13379 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| || || || |||||| |||| || || || || || ||||| |||||| || Sbjct 13834 AATGCAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAG 13775 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | | | | || || |||||| ||||| || || |||| |||||| Sbjct 13774 TGATACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCA 13715 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 || || | || | ||| || || ||||||||||| ||| || |||||||||| Sbjct 13714 GCAGAGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAA 13655 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || ||||| ||||| ||| | || || | ||||| || || Sbjct 13654 TATCCAGAAAGAGAGCACACTTCATCTCGTACTGAGACTGCGTGGAGG 13607 >seq852 Length=358492 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||| ||||| | || || ||||||||||| ||||| |||||||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | || || ||| ||| ||||||||||| | || ||||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || | |||| ||| || || ||||| |||||| | || | ||||||||||| Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| || || || || | ||| |||| ||||| Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||| ||||| |||| || ||||| || || | || |||||| ||| Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | |||||| ||||| || |||||||| |||| ||||| Sbjct 357354 GATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAG 357295 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || |||||||||| ||| || || |||||||| || | || | | ||||||||| Sbjct 357294 CAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATAAT 357235 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111420 || ||||| ||||| || | ||| | || | ||||| || ||||| ||| || Sbjct 357234 ATCCAAAAGGAATCCACTTTGCATCTGGTACTTCGTCTTCGTGGTGGAAATTAA 357181 Score = 102 bits (112), Expect = 7e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 111178 AGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACG 111237 || || |||||||| ||||| || ||||| | || || || || ||||| |||| Sbjct 358107 AGATTGAAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTA 358048 Query 111238 GAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCC 111297 || || ||||| | | | | |||||| ||| ||| |||||||||||| |||| Sbjct 358047 GAGCCAAGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCG 357988 Query 111298 GTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCC 111357 ||| ||||| ||| | |||| || || || ||| | ||||| | ||| || | Sbjct 357987 CCCGACCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCT 357928 Query 111358 GATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||||||| || || ||||||||||| || ||||| || | ||| || | || || Sbjct 357927 GATTATAACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGG 357872 >seq1218 Length=332501 Score = 113 bits (124), Expect = 4e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| |||||||||||| | ||||| || || || || ||||| || |||||| Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | |||||| |||||| |||||||||||| |||| ||| ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || || || | ||| || || || |||||||| | ||| | |||| || ||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAAT 111421 || || ||||| || || || |||||||| | | ||| | || || ||| ||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGAAATTAAT 114511 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||| ||||||||||| |||| |||||||| ||||| | ||| |||||||| Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || || |||||| |||||||||||| |||| ||| || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTAT 111363 |||| | | || | |||||| |||||| ||||||| | | |||| | ||||| Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTAT--CGGATTAC 114225 Query 111364 AATATACAAAAAGAATCTACACTACA 111389 || || || |||||||| || || || Sbjct 114226 AACATCCAGAAAGAATCCACGCTTCA 114251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422986085799400