Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2640 187 6e-42 seq852 165 2e-35 seq1218 147 5e-30 seq1332 125 2e-23 >seq2640 Length=94256 Score = 187 bits (206), Expect = 6e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| ||||||||||||| ||||| ||||| ||||||||||| |||| Sbjct 13606 TCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGA 13665 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| |||||||| ||||| ||||| || ||||||| | ||| ||| ||| Sbjct 13666 CAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGG 13725 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||| || || || |||||||| || |||||||| || || | ||| || | ||| || Sbjct 13726 AATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCAC 13785 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||| | ||||| ||||| || |||| || || ||||||||||||||||| Sbjct 13786 TTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATTAT 13836 Score = 179 bits (198), Expect = 9e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || || || || ||||||| || |||||||| || || || |||| Sbjct 13378 TCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGA 13437 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || ||||| |||||||| || |||||||||||||| || ||| || Sbjct 13438 AAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGG 13497 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || ||||||||||| || || || ||||| || | || |||| ||| || Sbjct 13498 GATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGAC 13557 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct 13558 TTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | ||| ||||| ||||| | ||| |||||| || || |||||||| | Sbjct 12922 TCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGA 12981 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||||||||||||||| || || || || | ||||||| | || Sbjct 12982 CAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGG 13041 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||||| || |||||||| ||||| || || || || | ||| |||| || || Sbjct 13042 AATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCAC 13101 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 13102 TTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || ||||| || || ||||||| || ||||||||||| || || || | Sbjct 12695 CCGCCACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGAC 12754 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||||| ||||| || |||||||||||||| |||||| ||| Sbjct 12755 AGTGTGCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGT 12814 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||| || || || || || ||||| |||| || || | || ||| Sbjct 12815 ATACCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACT 12874 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| ||||| ||||| || || || ||||| ||||||||| Sbjct 12875 TCTAAAGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATT 12922 Score = 150 bits (166), Expect = 4e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || ||||| || | ||| || || || |||||||| || ||||| || || Sbjct 13186 TTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAA 13245 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||| || ||| | || || || |||||||| || ||||| || || ||||| Sbjct 13246 GATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTT 13305 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||||| || |||| |||||||| || ||||| ||||| ||||| ||||| || || Sbjct 13306 TTCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAAC 13365 Query 288462 GAATATCTGCATT 288474 || ||||||||| Sbjct 13366 AAAGATCTGCATT 13378 Score = 149 bits (164), Expect = 1e-30 Identities = 150/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| | | ||||||||||||||||| || || || || || Sbjct 12503 TCTTTCTGGATATTGTAGTCCGACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAAT 12562 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||||| |||| || || |||||||| || || ||||| || || ||| Sbjct 12563 ATCAGCCTCTGTTG---ATCTGGAGGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACG 12619 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 |||||||||| || |||| |||||||| || ||||| |||||||| || || || || Sbjct 12620 TTTTCTATAGTGTCACTCGGCTCTACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTT 12679 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 12680 ACAAAGATCTGCAT 12693 >seq852 Length=358492 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || |||||| || || | |||||| ||||| | ||| ||| |||||||||||||| || Sbjct 357184 ATTTCCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATC 357243 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | || ||||| ||||| || ||||| |||||||| || || || | ||| ||| | Sbjct 357244 AGAAAGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGG 357303 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||| || ||||||||||| |||||||| ||||| || |||||||| | |||||| | ||| Sbjct 357304 TGGAATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTC 357363 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || || || || ||||| || || || ||||| ||||| Sbjct 357364 CACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | |||||| || | ||| | ||| ||| || ||||| || || || | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| ||||| ||||| ||||| || || || |||| ||||| || | ||| Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||||||||| || || |||||||| |||| |||||| | |||||| Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || || || || || | ||||| ||||| ||||||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | | |||||| | |||| ||| ||||||||| |||||||| |||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||||||||| ||||| || || || | | ||||||| || Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || || || || || ||||||||||| | ||| || | ||| ||| Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||| || || || || || ||||| || || ||||| ||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 >seq1218 Length=332501 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | ||||| || | ||||| || |||||| || || ||||| || | Sbjct 114048 TCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGA 113989 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | || || || || |||||||||||||||||| ||| Sbjct 113988 CAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGG 113929 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||||||||| || || ||||| || || ||||||| ||| || | || || Sbjct 113928 GATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAAC 113869 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| | || || ||||| || |||| || || || |||||||||||| Sbjct 113868 TTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCATT 113820 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||| | || || || || || || ||||| | Sbjct 113470 CCACCACGGAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 113411 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || ||||| ||||| |||||||| ||| || Sbjct 113410 AGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGA 113351 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| || | |||||| ||||| || | ||| || | || || Sbjct 113350 ATACCTTCCTTATCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACC 113291 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || || || ||||| || | ||||| ||||| |||||||| ||| Sbjct 113290 TCAAGAGTAATTGTTTTCCCAGTTAATGTCTTAACGAAGATCTGCATGATG 113240 >seq1332 Length=188647 Score = 125 bits (138), Expect = 2e-23 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||| |||| ||||| || || || |||| ||||| || || ||||||||||| Sbjct 168994 CCGTCCGCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCATACGGGATTCCTTCC 169053 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||||||||| ||||| |||||||| |||| |||||| | |||||| || | || Sbjct 169054 TTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTA 169113 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || | ||||| ||||| ||||||||| Sbjct 169114 ATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 169152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179496349534846