Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2640 107 2e-18 seq1287 105 7e-18 seq3093 104 3e-17 seq292 104 3e-17 seq2260 102 9e-17 seq2025 95.1 1e-14 seq1218 95.1 1e-14 seq852 84.2 2e-11 seq1693 82.4 8e-11 >seq2640 Length=94256 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | ||||||||| || | ||| ||| || || |||||||| || | | Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| ||||||||||| || || ||||| || | ||| || || | || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || ||||| |||||| || | | | | ||||| |||| || || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || ||||| || || ||||||||||| ||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||||| ||||| || || ||| || ||||||||||||||||| | Sbjct 12239 CCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAA 12298 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| |||||||| || || || || || |||| ||||||||| | || Sbjct 12299 AGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGA 12358 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||| || || |||| || | | |||||| |||| || || Sbjct 12359 ATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACT 12418 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || || ||||| || || | || || || || ||||||||| Sbjct 12419 TCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCATT 12466 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||||| ||||| |||| || ||||||||||| || ||||||| Sbjct 13150 ACCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGA 13209 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || |||| |||||| || || || || || || ||||| || | || Sbjct 13210 GAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGG 13269 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||| || || |||||| |||| | | | ||||| |||| || || Sbjct 13270 AATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTAC 13329 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | |||||||| || || || || || || |||||||| |||||| Sbjct 13330 TTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 >seq1287 Length=205155 Score = 105 bits (116), Expect = 7e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 185187 AAAAATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 185246 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 185247 TGACCACTATACTACCGAGGA 185267 >seq3093 Length=77097 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 71797 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 71738 Query 57058 TCACCACTATACTACCGAGGATTGA 57082 | |||||||||||||||||||| || Sbjct 71737 TAACCACTATACTACCGAGGATCGA 71713 >seq292 Length=578259 Score = 104 bits (114), Expect = 3e-17 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||| |||||| ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 297451 AAATATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 297510 Query 57057 CTCACCACTATACTACCGAGGATTGAA 57083 || ||||||||||||||||||| |||| Sbjct 297511 CTGACCACTATACTACCGAGGACTGAA 297537 >seq2260 Length=179467 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 |||||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 35625 TTTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 35566 Query 57063 ACTATACTACCGAGGATTG 57081 |||||||||||||||| || Sbjct 35565 ACTATACTACCGAGGACTG 35547 >seq2025 Length=256430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 72007 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 71948 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 71947 TACTACCGAGGA 71936 >seq1218 Length=332501 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 7/241 (3%) Strand=Plus/Minus Query 41969 ATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAAT 42028 |||||||| |||||||| | | | || ||||||| || ||| || ||||| Sbjct 114511 ATTAATTT-----CCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAAT 114457 Query 42029 ATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTG 42088 |||||| || | ||||| || |||| || | |||||| || || || || |||| ||| Sbjct 114456 ATTGTAGTCGGAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTG 114397 Query 42089 CTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGT 42147 ||||||| || | || || |||||| ||| |||| | ||| | | | | |||| Sbjct 114396 TTGGTCGGGCGGAATGCCTTCTTTGTCC-TGAATTTTAGCTTTTACATTTTCTATTGTGT 114338 Query 42148 CGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 42207 |||| | || || || | || || || || || || ||||| || ||||| ||||||| Sbjct 114337 CGCTGGGCTCTACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCA 114278 Query 42208 T 42208 | Sbjct 114277 T 114277 >seq852 Length=358492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||| | || ||||| || || |||||||| | || ||| || |||| || Sbjct 357661 CACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTC 357720 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 || ||| ||||| || || || | ||||||||||| | || | | ||||| ||| Sbjct 357721 TAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTG 357780 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| || | | | | || ||||| | ||| || || | || |||||||| Sbjct 357781 GATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTTT 357840 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || |||| ||||| || || || |||||| Sbjct 357841 TCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 >seq1693 Length=272196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 7/77 (9%) Strand=Plus/Plus Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061 ||||||||| |||| | ||||| |||||||||||||||||||| |||||||| Sbjct 187440 ATTTTCTCCCCGGCGGGGAATCG-------GTCTCCCGCGTGACAGGCGGGGATACTCAC 187492 Query 57062 CACTATACTACCGAGGA 57078 ||||||||||||||||| Sbjct 187493 CACTATACTACCGAGGA 187509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543141795296880