Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1218 170 2e-37 seq2640 156 4e-33 seq852 136 4e-27 >seq1218 Length=332501 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||||||| || || || |||| ||| |||||||| || ||||||||||| | Sbjct 114276 ACCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGA 114217 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||||| ||||||| || || || || ||| | || | || || ||||||||||| Sbjct 114216 TAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGG 114157 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| || || ||||| ||| ||| || | |||||||| || || || Sbjct 114156 AATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAAC 114097 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| ||| | || ||||| |||| |||||| || || ||||||||| Sbjct 114096 TTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATT 114048 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| ||||| || | ||||| ||||||||||| |||||||| ||||||| Sbjct 114047 CCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGAC 113988 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| ||||||||||| ||| | || || ||||| || || || || Sbjct 113987 AGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGG 113928 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| || || || || |||||| ||| | ||||||| | || ||| Sbjct 113927 ATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACT 113868 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||||||| ||||| ||||| || || || |||||| Sbjct 113867 TCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCATT 113820 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| || || ||||| | ||||| || || || || ||||| |||| Sbjct 113819 CCACCACGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGAC 113760 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || |||||||||||||| ||| | ||||| |||||||| || || ||| Sbjct 113759 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGA 113700 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| | |||| ||||| ||| ||| | || |||| || || || Sbjct 113699 ATACCTTCCTTATCTTGGA-TTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTAC 113641 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || |||| || || || ||||| ||||| Sbjct 113640 CTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || ||||| | || || || || ||||||||||| || | | ||| || | Sbjct 113458 CTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCA 113399 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || ||||||||||| ||| | ||||| |||||||| ||||| ||||| ||||| || Sbjct 113398 TCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTA 113339 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || || ||| || | |||||||| | ||||| || | ||| | Sbjct 113338 TCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATT 113279 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || || || || ||||| || ||||| Sbjct 113278 GTTTTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 >seq2640 Length=94256 Score = 156 bits (172), Expect = 4e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | ||| ||||| ||||||| ||||| |||||||| ||||||||||||| Sbjct 12694 ACCGCCACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGA 12753 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| ||||| || || || | || || || || || ||||| || Sbjct 12754 CAGTGTGCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGG 12813 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| || || || || ||||||| || | || |||| || ||||| Sbjct 12814 TATACCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCAC 12873 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| ||| | |||||| ||||| | ||||| ||||| || |||||| Sbjct 12874 TTCTAAAGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATT 12922 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||||||| || |||||||| | || |||||||| |||||||| || || | Sbjct 12923 CCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGAC 12982 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| | || || || ||| |||| || | ||| || || |||||| Sbjct 12983 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGA 13042 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCAC 64395 ||||||||||| ||||| |||||| |||||| ||| | ||||||| |||| ||||| Sbjct 13043 ATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGC-TCCAC 13101 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||| || |||| || ||||||||||| ||||| Sbjct 13102 TTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 145 bits (160), Expect = 8e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| |||||||||| | ||||| ||||||| ||||| || || Sbjct 12269 GTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCGTCTTCTAGCTGTTTTCCC 12328 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || | ||||||||| |||||||| ||||| || |||||||| || ||| Sbjct 12329 GCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGTATCTTCGCCTTG 12388 Query 64367 ACAACCTCCACTGTATCAC-CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | || |||| |||| || ||||| | |||| || || || ||||| || Sbjct 12389 ACGTTCTCGATCGTGTCACTCGGC-TCGACTTCCAGTGTTATTGTTTTACCAGTCAATGT 12447 Query 64426 TTTTACGAAAATTTGCATT 64444 ||| ||||| ||||||||| Sbjct 12448 TTTCACGAATATTTGCATT 12466 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | |||||| | ||| | |||| || || ||||| || || ||||| || | Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| ||||||| |||||||| |||||| | || |||| ||| || || |||||| Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCAC 64395 || |||||||| |||||||||||| |||||| || | || |||| |||| || || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGC-TCTAC 12645 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||| | |||||| || || | |||||||| || || ||||| Sbjct 12646 TTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 141 bits (156), Expect = 9e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||||| ||||| |||||||||||||||||||| | | |||||| | Sbjct 13391 CTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCA 13450 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| | || || ||||| | || || || ||||| |||||||| |||||||| || Sbjct 13451 TCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTG 13510 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || |||||| ||| ||| || | ||| |||| | || ||||| | || | | Sbjct 13511 TCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATG 13570 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| ||||| | || || |||||||| |||||| Sbjct 13571 GTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| ||||||||||| ||||| | || ||| || | ||||| | |||||| ||| Sbjct 13181 GTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTGCTTTCCG 13240 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || ||||| || || ||||| || ||||| |||||||||||| ||| Sbjct 13241 GCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTTTGCCTTG 13300 Query 64367 ACAACCTCCACTGTATCAC-CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || |||| |||| || ||||| | ||| | |||||| ||||| | ||| Sbjct 13301 ACGTTTTCTATAGTGTCACTCGGC-TCTACTTCCAGAGTGATGGTCTTTCCGGTGAGAGT 13359 Query 64426 TTTTACGAAAATTTGCATT 64444 ||| || || || |||||| Sbjct 13360 TTTAACAAAGATCTGCATT 13378 >seq852 Length=358492 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||||||||||||| | ||| | ||| ||||| || || ||||||||||||| Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | ||| || |||||| |||| | ||||||||||| || || Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || ||||| |||||| || | ||||| | | || || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | ||| || || || || || || |||||||| |||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | ||| || | |||| ||| |||||||||||||| || ||||| | Sbjct 357415 ACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGA 357474 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | ||||| |||||| |||| | | ||| || ||||| || Sbjct 357475 TAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGG 357534 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || ||| ||| || || | ||||||| || || || Sbjct 357535 TATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||| || || || | |||||| || || |||||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499579490179080