Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq852 116 4e-21 seq2640 113 4e-20 seq1218 104 2e-17 >seq852 Length=358492 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||| | ||| ||||| | | | || || || |||||||| || || | Sbjct 357872 CCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGAC 357931 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| |||||||| || |||| | || | | ||||||||| || || Sbjct 357932 AAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGA 357991 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | |||| ||||| | || | |||||| | | ||| || Sbjct 357992 ATGCCTTCTTTGTC-TTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTAC 358050 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||| |||||||| || ||||||||||| Sbjct 358051 CTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| || || || || | || || |||||| | ||| || || | | Sbjct 357221 GATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCCAATTGCTTTCCTGCA 357280 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || | ||| || || || || ||||||||||| || |||||| ||||| Sbjct 357281 AAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTAGCTTTTACA 357340 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | ||| ||| | | |||||||| | || | |||||||||||||| ||||| Sbjct 357341 TTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTA 357400 Query 138601 ACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 357401 ACAAATATTTGCAT 357414 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||| | || || || | | || || |||||||| || || ||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| || |||| | | |||| | |||||| || || ||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| | |||| || | | ||| | ||| || | | || || Sbjct 357536 ATACCTTCTTTGTC-TTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | ||||| ||||| |||||||| ||||| || ||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 >seq2640 Length=94256 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | || |||| ||| | | || || || |||||||| ||||| | Sbjct 12923 CCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGAC 12982 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | |||||| || | | | || || | |||||| || ||||| Sbjct 12983 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGA 13042 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||||||| ||||| | || | ||| || ||| |||||| Sbjct 13043 ATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCACT 13102 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| || ||||| ||||||||||| Sbjct 13103 TCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | | ||||| || || || |||||||| | Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || |||| | | || || | |||||| || ||||| Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| |||| | ||| | ||||| ||| ||| || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || ||||||||||| |||||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478 ||||| ||||| |||||||| || | | ||| |||| ||| || || |||||||| | Sbjct 12728 GACTCTTTTTGGATGTTGTAATC--TGACAGTGTGCGACCGTCTTCTAGCTGTTTACCCG 12785 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 |||| ||||| ||||| || || ||||||||||||||||| ||| | || | ||| Sbjct 12786 CGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTC-CTGAATCTTAGCCTTT 12844 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | ||| | ||||| | | |||||| || | || | || || || || || ||| Sbjct 12845 ACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTTTCCGGTAAGTGTT 12904 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 12905 TTCACGAAGATCTGCAT 12921 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| |||||||||||||| ||| | || || || || | ||||||||||| Sbjct 13412 GACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTCCAATTGTTTACCGGCG 13471 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || || ||||| || ||||| ||||| ||||||| || | Sbjct 13472 AAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACA 13531 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | ||||| ||| || || || | || | || ||||| || || || || Sbjct 13532 TTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTG 13591 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 13592 ACGAAAATCTGCAT 13605 >seq1218 Length=332501 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | | ||||| || ||||| ||||||||| | |||||| ||| || Sbjct 114486 AACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTC 114427 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | || || || | | |||| || | ||||||||| || || || ||||||||||| | Sbjct 114426 CAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTC-CT 114368 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| | ||||| | ||| | |||||| | | ||| || || | || | || | Sbjct 114367 GAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCT 114308 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || || ||||| ||||| || ||||| Sbjct 114307 TTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||| || | || ||| ||| || |||||||| || | | Sbjct 114242 GATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCA 114183 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||||| ||| |||||||| ||||| || ||||||||||| ||| |||| | |||| Sbjct 114182 AAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATTTTAGCCTTAAC 114124 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || || | | || || || | || | ||||| |||||||||||||| Sbjct 114123 ATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTT 114064 Query 138600 TACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 114063 GACAAATATTTGCAT 114049 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || ||||| |||||||| || || || | | Sbjct 113437 GACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCTGCA 113378 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| || || || || |||||||| || || ||| || ||| | Sbjct 113377 AAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTCACA 113318 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | ||||||||| | || | ||||| ||||| | || || Sbjct 113317 TTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTCTTA 113258 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 113257 ACGAAGATCTGCATG 113243 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || || |||||||| || || || ||||| Sbjct 113802 AACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTC 113743 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || || || || | | |||| |||||||| || || || || |||||||| || || Sbjct 113742 AAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTG 113683 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||| | | || | ||||| | | ||| ||||| | ||| | || || Sbjct 113682 GATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTT 113623 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || || |||||||||||||| Sbjct 113622 TCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496197532301040