Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2640 138 1e-27 seq852 116 4e-21 seq1218 89.7 5e-13 >seq2640 Length=94256 Score = 138 bits (152), Expect = 1e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | | | ||||| ||| | || |||||||||||||| ||||||||| Sbjct 13378 TCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGA 13437 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || | ||||| || ||| |||||| || |||||||||||||| Sbjct 13438 AAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGG 13497 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTC---TC 127062 || || ||||||||| |||||| ||||| | ||||| ||||| |||| || Sbjct 13498 GATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTC---ACTCGGTTC 13554 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| | ||| | || || ||||| || || || || ||||||||||| Sbjct 13555 GACTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | | |||| ||||| |||| || || |||||||||||||||||||| Sbjct 12238 TCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGA 12297 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| || |||||||||||||| || | || | || |||||| || ||||| Sbjct 12298 AAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGG 12357 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || ||| ||||| | |||| ||||| | |||||| Sbjct 12358 AATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGAC 12417 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || |||| ||||| || || || ||||| Sbjct 12418 TTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || ||||||||||| || |||||||| || |||||| || || Sbjct 12712 CACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTC 12771 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||||||| || ||| |||||| || || |||||||| ||||| || || |||||| Sbjct 12772 TAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTG 12831 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | | ||||| ||||| | ||| ||||| | || | || || Sbjct 12832 AATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTT 12891 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || ||||| || || |||||||| Sbjct 12892 TCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 |||| ||||||||| || | || |||||||| || |||||||| || || |||||| Sbjct 12476 AATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGTGCGT 12535 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 || |||||||| || || || | |||| | ||| ||||| ||||| ||||| || Sbjct 12536 CCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGAATGCCTTCT 12595 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| ||||| ||| | | ||| | ||||| | ||| ||||| | || Sbjct 12596 TTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACTTCTAGAGTG 12655 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || || || || ||||||||||| |||||||| Sbjct 12656 ATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || |||| || || | ||| | || || ||||| ||||| || || || Sbjct 12922 TCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGA 12981 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || ||| ||| |||| ||||||||||| | || | || ||| ||||| ||||| Sbjct 12982 CAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGG 13041 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || || ||||| |||||| ||| || | | |||| ||| || | ||| | Sbjct 13042 AATTCCTTCTTTGTCTTGGATTTT-TGCTTTTACATTCTCGATGGTATCACTCGGCTCCA 13100 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | || || || ||||| || ||||| ||||||||||| Sbjct 13101 CTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 |||||| || ||||| |||||| || ||||| || || | || |||||||| | Sbjct 13642 CTCTTTCTGGATATTATAATCGGACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAA 13701 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||||| |||||||||||| || || ||||||||||| |||||| ||| | | Sbjct 13702 GATCAATCTCTGCTGATCGGGTGGAATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTT 13761 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| || || | || ||||| | || | || || || |||| ||||| || Sbjct 13762 CTCGATCGTATCACTTGGTTCCACTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCAC 13821 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 13822 GAATATCTGCAT 13833 >seq852 Length=358492 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || || | ||||| || | |||||| |||||||||||||| |||||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| |||| || ||||| || | || |||| ||| |||||||| ||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || |||| | ||| | | || ||||| | ||| | ||| || | || || Sbjct 357536 ATACCTTCTTTGT-CTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || || |||||||| ||||| || ||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| | ||||||||| | |||||| || || || || |||||||| | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || |||| |||||| || || | ||||| |||||||| || || || Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| |||||| ||| | | ||||| || || | || || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || | || || || ||||||||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| ||||| ||||| || ||||| || |||||| || || Sbjct 357890 ACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCG 357949 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || ||||| ||| | ||||| | ||| || ||||| || ||||| || ||||| || Sbjct 357950 AGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCT-TG 358008 Query 127025 ATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | | | ||||| | | |||| ||||| | ||| || || | || | || || Sbjct 358009 AATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTT 358068 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || |||||||| || ||||||||||| Sbjct 358069 CCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 >seq1218 Length=332501 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| | || | || | ||| || ||||| || || |||||||| Sbjct 114275 CCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGAT 114216 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || || |||||||| || |||| || || || || |||||||| Sbjct 114215 AGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGA 114156 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| || |||||| ||||| ||| | | ||| | || || | || ||| Sbjct 114155 ATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACT 114096 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | |||||||| ||||||||||| ||||| || ||||| Sbjct 114095 TCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | || |||||||| ||||||||||| ||| | || ||| || || Sbjct 114485 ACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCC 114426 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| || || || |||||| || ||| || ||||| || ||||| || |||||| || Sbjct 114425 AACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCC-TG 114367 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || || | | ||| | ||||| | ||| ||||| | || | || || Sbjct 114366 AATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCTT 114307 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || ||||| ||||| || ||||| Sbjct 114306 TCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475438646101680