Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2640 123 2e-23 seq852 120 3e-22 seq1218 111 1e-19 >seq2640 Length=94256 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||||||||| || |||||||| || ||| | ||| || || || Sbjct 13175 TGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTGC 13234 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | || | |||||||| || || |||||||| ||||||||||| |||||| Sbjct 13235 TTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTTT 13294 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| ||||| ||||| | ||| ||||| ||||| | || || ||||| Sbjct 13295 GCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATGGTCTTTCCGGTG 13354 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 |||||||| ||||| || ||||| Sbjct 13355 AGAGTTTTAACAAAGATCTGCAT 13377 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || ||||| | ||| ||||| || || || || ||||| || || |||||| Sbjct 13376 ATTCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCG 13435 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||||||||| || ||| | |||| |||||||| || || Sbjct 13436 GAAAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGA 13495 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || || || |||||| |||| ||| | ||||| | ||| Sbjct 13496 GGGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCG 13555 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | || || ||||| || || || || ||||| ||||| Sbjct 13556 ACTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || | |||| |||||||| || || ||||| || || || ||||| || Sbjct 12920 ATTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCC 12979 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || ||| || ||||||||||| || | || | || || || || | Sbjct 12980 --GACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAG 13037 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||| ||||| |||||| ||| | || | ||| || | || Sbjct 13038 GAGGAATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCT 13097 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || | || || || || || || ||||| ||||| ||||| Sbjct 13098 CCACTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 82.4 bits (90), Expect = 7e-11 Identities = 166/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 |||||||| | | |||||||| | || || || || || || |||||||| || || Sbjct 12464 ATTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCC 12523 Query 45170 GCTGACG-GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 | ||| | | | || || | || || || || |||||| | || || || | Sbjct 12524 GACAACGTGCGTCCG--TCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTG 12581 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | |||||||||||||| ||||| |||||| || | ||||| ||||| | || Sbjct 12582 GAGGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCT 12641 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 | ||||| ||||| | || || || || || ||||||||||| || ||||| ||| || Sbjct 12642 CTACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCATACCGCCAC 12701 Query 45349 CAA 45351 || Sbjct 12702 GAA 12704 >seq852 Length=358492 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||||| || ||||||||||||||||||||||| | ||| | || ||| Sbjct 357206 ACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCC 357265 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| |||||||| | || | | ||||| || || ||||| |||||||||||||| Sbjct 357266 AATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGG 357325 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||||| ||| ||| || || || || | ||| | ||||| Sbjct 357326 ATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTTTTA 357385 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| ||||| |||||||| Sbjct 357386 CCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Score = 118 bits (130), Expect = 1e-21 Identities = 159/220 (72%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| ||||| ||||| |||||||||||| | ||| | ||| || ||||| Sbjct 357440 TGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCTAATTGC 357499 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | || |||| || || || ||||| || |||||||| |||||||| ||| Sbjct 357500 TTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTTT 357559 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| ||||| ||| || | || ||||| | |||| ||||| || || Sbjct 357560 GCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTTCCAGTA 357619 Query 45318 AGAGTTTTTACAAAAATTTGCATCGCGCGAC-CAATTTAA 45356 |||||||| ||||| ||||||||| | | || |||| ||| Sbjct 357620 AGAGTTTTCACAAATATTTGCATCCCACCACGCAATCTAA 357659 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || ||||| || || || |||||||| | || | || || | ||| Sbjct 357895 ATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCGAGTTG 357954 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||||| ||| | ||||| | || ||||| ||||||||||||||||| |||||||| || Sbjct 357955 CTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTT 358014 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | ||| | || | |||||| | ||| || || | ||||| || || || || Sbjct 358015 TGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCAGT 358074 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||| || ||||| ||||| Sbjct 358075 TAGAGTTTTAACGAAAATCTGCAT 358098 >seq1218 Length=332501 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | || || | |||| |||||| || || || || || ||||| || ||| Sbjct 114505 TTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGG 114446 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | || ||||| || || ||||| | |||| || || ||||| |||| Sbjct 114445 AAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCG 114386 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 ||||||||||||| || |||||||| ||| | ||||| |||||| | ||| | Sbjct 114385 GAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTA 114326 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || || | || || ||||| || ||||| ||||| |||||||| Sbjct 114325 CTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || ||||| ||||| || ||||| || ||||| | ||| || ||| Sbjct 114257 ACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCC 114198 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||||||| || | || || ||||| ||||| || |||||||||||||| || ||| Sbjct 114197 AGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGA 114138 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| || | ||| | || || | || ||||| | ||||| |||||| Sbjct 114137 ATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTG 114078 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||||||| ||||| |||||||| Sbjct 114077 CCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451944117531720