Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1577 102 1e-16 seq1231 96.9 4e-15 seq1934 87.8 2e-12 >seq1577 Length=128996 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 140606 CTGGTTGCGGGAAGTTCCTTAGAGCTCTAACTACCACCCCCATTTGGAAACTTTTGGGGG 140665 || ||||| |||||| ||||||||||| |||||||| | | |||||||||| | | | | Sbjct 100711 CTTGTTGCAGGAAGTCCCTTAGAGCTCCAACTACCATCTCTATTTGGAAACATATAGAGA 100770 Query 140666 GATCTCGGTTAATTACCGAACCCGATGGTAAAAAGGTTAGAGATTGGATAATCCGCAGGC 140725 | | || |||| |||| || | ||||||| ||| ||||||| |||||||||||| Sbjct 100771 AAACCAGGGTAATGACCGGCTCCAACGGTAAAACCGTTTGAGATTGTGTAATCCGCAGGC 100830 Query 140726 GAGAACCTACGTTCGC 140741 ||| |||| ||| || Sbjct 100831 GAGTTCCTAAGTTAGC 100846 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 140606 CTGGTTGCGGGAAGTTCCTTAGAGCTCTAACTACCACCCCCATTTGGAAACTTTTGGGGG 140665 || ||||| |||||| ||||| ||||| |||||||| | | |||||||||| | | | | Sbjct 128878 CTTGTTGCAGGAAGTCCCTTACAGCTCCAACTACCATCTCTATTTGGAAACATATAGAGA 128937 Query 140666 GATCTCGGTTAATTACCGAACCCGATGGTAAAAAGGTTAGAGATTGGATAATCCGCAGG 140724 || | ||| |||| |||| || | ||||||| ||| ||||||| ||||||||||| Sbjct 128938 GAACCCGGGTAATGACCGGCTCCAACGGTAAAACCGTTTGAGATTGTGTAATCCGCAGG 128996 >seq1231 Length=279992 Score = 96.9 bits (106), Expect = 4e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 140606 CTGGTTGCGGGAAGTTCCTTAGAGCTCTAACTACCACCCCCATTTGGAAACTTTTGGGGG 140665 || ||||| |||||| ||||| ||||| |||||||| | | |||||||||| | | | | Sbjct 126536 CTTGTTGCAGGAAGTCCCTTACAGCTCCAACTACCATCTCTATTTGGAAACATATAGAGA 126595 Query 140666 GATCTCGGTTAATTACCGAACCCGATGGTAAAAAGGTTAGAGATTGGATAATCCGCAGGC 140725 || | ||| |||| |||| || | ||||||| ||| ||||||| ||||||||||| Sbjct 126596 GAACCCGGGTAATGACCGGCTCCAACGGTAAAACCGTTTGAGATTGTGTAATCCGCAGGG 126655 Query 140726 GAGAACCTACGTTCGC 140741 ||| ||| ||| || Sbjct 126656 GAGTTACTAAGTTAGC 126671 >seq1934 Length=119091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 140605 CCTGGTTGCGGGAAGTTCCTTAGAGCTCTAACTACCACCCCCATTTGGAAACTTTTGGGG 140664 ||| ||||| ||||||||||||||||| |||||||| |||||| |||||| | | | Sbjct 66962 CCTTGTTGCAAGAAGTTCCTTAGAGCTCAAACTACCATATCCATTTAGAAACTGATAGAG 66903 Query 140665 GGATCTCGGTTAATTACCGAACCCGATGGTAAAAAGGTTAGAGATTGGATAATCCGCAGG 140724 | ||||| |||| || | | |||||||| ||| |||||||| |||| ||| | Sbjct 66902 AAAACTCGGGTAATGTCCAGCTTCAAAGGTAAAAACGTTTGAGATTGGGTAATATGCAAG 66843 Query 140725 CGAGAACCTACGT 140737 |||| |||| || Sbjct 66842 CGAGTTCCTAAGT 66830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613427006940120