Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1218 136 9e-27 seq2640 127 5e-24 seq852 109 1e-18 >seq1218 Length=332501 Score = 136 bits (150), Expect = 9e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || || ||||| ||||||||||| |||| |||||||| | || || Sbjct 113813 CGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTG 113754 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||||||||||||||| || || ||| ||| Sbjct 113753 CGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCT 113694 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || || ||| || ||||| || | ||||| | | ||||| |||| Sbjct 113693 TCCTTATCTTGGAT-TTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAG 113635 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| ||||| || || ||||||||||| || Sbjct 113634 CGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTG 113596 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || || |||||||| |||||||| || | ||||||||||| || || Sbjct 113464 CGGAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTA 113405 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||||||||||||||| || || ||| ||| Sbjct 113404 CGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCT 113345 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 113344 TCCTTATCCTGGATCTT 113328 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || ||||| || || || | ||| || || | || || | ||||||||||||||| Sbjct 114023 TGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGGCCATCTTCCAGCTGC 113964 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| |||||||| || || || ||||||||| ||||||||||| Sbjct 113963 TTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTG 113904 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || || | || || ||| || || ||||| || || ||||| || || Sbjct 113903 GCTTTTACATTCTCTATAGTATCACTTGGCTCAACTTCCAAGGTAATGGTCTTGCCAGTC 113844 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||||| ||||| || || Sbjct 113843 AAGGTTTTAACAAATATCTG 113824 >seq2640 Length=94256 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || || | ||| |||||||| |||||||| | ||| || |||| | || | Sbjct 13160 AGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGA 13219 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| | |||||||||||| ||||| ||||| ||||| || || ||| || ||| Sbjct 13220 CCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCT 13279 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || || ||| ||| ||| ||| | ||||| | | ||||| |||| ||| Sbjct 13280 TTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGTG 13339 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||||||||| ||||| || || Sbjct 13340 ATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTG 13374 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| || || || || || || |||||||| ||||| | |||||| || | | || Sbjct 13385 CGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTG 13444 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || ||||||||||| ||||| ||||| || ||| |||||| Sbjct 13445 CGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCT 13504 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || ||| ||| || ||||| ||||| | | ||| || |||| Sbjct 13505 TCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGG 13564 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| ||||| || || || ||||| || Sbjct 13565 GTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTG 13602 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| || || || || || |||||||| ||||||| |||||| || | || || Sbjct 12701 CGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTG 12760 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||| || || |||||||| ||||| || || || || || ||| Sbjct 12761 CGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCT 12820 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| ||| || ||||| ||||| | | || || || || Sbjct 12821 TCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAA 12880 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || |||||||| || || || Sbjct 12881 GTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTG 12918 >seq852 Length=358492 Score = 109 bits (120), Expect = 1e-18 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || || || || | ||| || |||| |||||| | || ||||| || ||| Sbjct 357896 TGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGC 357955 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||||||||| || | | ||| ||||| || ||| |||||| || ||||||||| Sbjct 357956 TTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTT 358015 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || |||| ||||| ||| ||||| ||||| || || ||||| || || Sbjct 358016 GCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCAGTT 358075 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||||||| || ||||| || |||||| Sbjct 358076 AGAGTTTTAACGAAAATCTG---CATTTT 358101 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||||| || || ||||| |||| |||||| || | |||||| | || Sbjct 357655 TCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACC 357714 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || | ||| || ||||| || || | ||||||||||| || |||||||| Sbjct 357715 GTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTT 357774 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| || || ||| ||| ||||| || || ||| |||||| ||||| || || Sbjct 357775 ATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAAT 357834 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | || ||||| ||||| || Sbjct 357835 GGTTTTTCCAGTTAATGTCTTCACGAAAATCTG 357867 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || || ||||| | || || || | || || | |||||| Sbjct 357431 AGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCT 357490 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||||||||||| || || | | ||| || || || || |||||| || Sbjct 357491 TCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCT 357550 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| ||| ||| | ||| || | | ||| || |||||||| || || Sbjct 357551 TGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTT 357610 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||||||||| ||||| Sbjct 357611 TTTCCAGTAAGAGTTTTCACAAATATTTG 357639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178763647715619